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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.1
nTPM
Monaco:
297.0
nTPM
Schmiedel:
475.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.1
HPA sample
nTPM
gdT-cell nTPM: 57.1
Samples: 6
Max nTPM: 63.9
Min nTPM: 52.0
P10809_1007
55.1
P10809_1022
54.6
P10809_1041
63.9
P10809_1060
62.9
P10809_1077
52.0
P10809_1098
53.9
MAIT T-cell nTPM: 44.2
Samples: 6
Max nTPM: 65.3
Min nTPM: 34.8
P10809_1006
65.3
P10809_1024
34.8
P10809_1043
38.5
P10809_1062
44.5
P10809_1083
37.5
P10809_1097
44.3
Memory CD4 T-cell nTPM: 47.0
Samples: 6
Max nTPM: 53.1
Min nTPM: 37.3
P10809_1014
53.1
P10809_1026
37.3
P10809_1045
52.6
P10809_1064
47.8
P10809_1086
44.2
P10809_1113
46.9
Memory CD8 T-cell nTPM: 50.3
Samples: 5
Max nTPM: 58.1
Min nTPM: 39.7
P10809_1012
58.1
P10809_1027
39.7
P10809_1046
42.8
P10809_1065
53.7
P10809_1111
57.4
Naive CD4 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 51.3
Min nTPM: 30.7
P10809_1015
49.5
P10809_1030
30.7
P10809_1049
33.1
P10809_1068
51.3
P10809_1085
40.2
P10809_1112
42.4
Naive CD8 T-cell nTPM: 46.0
Samples: 6
Max nTPM: 51.1
Min nTPM: 38.5
P10809_1016
42.4
P10809_1031
43.6
P10809_1050
51.1
P10809_1069
50.9
P10809_1087
49.2
P10809_1110
38.5
T-reg nTPM: 48.8
Samples: 6
Max nTPM: 57.4
Min nTPM: 39.9
P10809_1018
53.3
P10809_1037
51.9
P10809_1056
42.3
P10809_1075
39.9
P10809_1094
57.4
P10809_1106
48.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
297.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 190.8
Samples: 4
Max nTPM: 247.2
Min nTPM: 148.5
RHH5202_R3573
148.5
RHH5230_R3602
173.1
RHH5259_R3631
247.2
RHH5288_R3660
194.2
Effector memory CD8 T-cell nTPM: 257.4
Samples: 4
Max nTPM: 290.6
Min nTPM: 227.4
RHH5203_R3574
231.3
RHH5231_R3603
227.4
RHH5260_R3632
280.2
RHH5289_R3661
290.6
MAIT T-cell nTPM: 153.3
Samples: 4
Max nTPM: 169.8
Min nTPM: 132.4
RHH5233_R3605
132.4
RHH5205_R3576
169.8
RHH5262_R3634
152.1
RHH5297_R3663
158.7
Memory CD4 T-cell TFH nTPM: 212.5
Samples: 4
Max nTPM: 255.3
Min nTPM: 191.2
RHH5300_R3666
205.9
RHH5236_R3608
191.2
RHH5265_R3637
255.3
RHH5208_R3579
197.6
Memory CD4 T-cell Th1 nTPM: 211.4
Samples: 4
Max nTPM: 247.5
Min nTPM: 166.6
RHH5210_R3581
166.6
RHH5302_R3668
202.8
RHH5238_R3610
247.5
RHH5267_R3639
228.7
Memory CD4 T-cell Th1/Th17 nTPM: 202.4
Samples: 4
Max nTPM: 256.7
Min nTPM: 169.8
RHH5303_R3669
189.3
RHH5211_R3582
169.8
RHH5239_R3611
256.7
RHH5268_R3640
193.7
Memory CD4 T-cell Th17 nTPM: 209.4
Samples: 4
Max nTPM: 242.0
Min nTPM: 152.8
RHH5304_R3670
227.3
RHH5212_R3583
152.8
RHH5240_R3612
215.3
RHH5269_R3641
242.0
Memory CD4 T-cell Th2 nTPM: 200.5
Samples: 4
Max nTPM: 242.2
Min nTPM: 173.6
RHH5305_R3671
202.1
RHH5213_R3584
173.6
RHH5241_R3613
184.0
RHH5270_R3642
242.2
Naive CD4 T-cell nTPM: 191.0
Samples: 4
Max nTPM: 222.4
Min nTPM: 157.4
RHH5306_R3672
196.7
RHH5214_R3585
157.4
RHH5242_R3614
187.5
RHH5271_R3643
222.4
Naive CD8 T-cell nTPM: 164.7
Samples: 4
Max nTPM: 177.6
Min nTPM: 151.1
RHH5201_R3572
151.1
RHH5229_R3601
177.6
RHH5258_R3630
156.3
RHH5287_R3659
173.8
Non-Vd2 gdTCR nTPM: 242.2
Samples: 4
Max nTPM: 281.0
Min nTPM: 214.7
RHH5235_R3607
236.6
RHH5264_R3636
281.0
RHH5207_R3578
236.5
RHH5299_R3665
214.7
T-reg nTPM: 194.3
Samples: 4
Max nTPM: 217.7
Min nTPM: 173.8
RHH5301_R3667
184.9
RHH5237_R3609
200.9
RHH5266_R3638
217.7
RHH5209_R3580
173.8
Terminal effector memory CD4 T-cell nTPM: 297.0
Samples: 2
Max nTPM: 300.7
Min nTPM: 293.3
RHH5243_R3615
300.7
RHH5272_R3644
293.3
Terminal effector memory CD8 T-cell nTPM: 237.1
Samples: 4
Max nTPM: 318.9
Min nTPM: 157.8
RHH5232_R3604
239.3
RHH5204_R3575
157.8
RHH5261_R3633
318.9
RHH5296_R3662
232.3
Vd2 gdTCR nTPM: 183.0
Samples: 4
Max nTPM: 234.1
Min nTPM: 155.7
RHH5234_R3606
155.7
RHH5206_R3577
181.4
RHH5263_R3635
234.1
RHH5298_R3664
160.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
