We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.8
nTPM
Monaco:
115.2
nTPM
Schmiedel:
101.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.8
HPA sample
nTPM
gdT-cell nTPM: 50.1
Samples: 6
Max nTPM: 74.7
Min nTPM: 30.6
P10809_1007
30.6
P10809_1022
57.6
P10809_1041
74.7
P10809_1060
48.0
P10809_1077
38.9
P10809_1098
50.9
MAIT T-cell nTPM: 42.9
Samples: 6
Max nTPM: 51.2
Min nTPM: 33.5
P10809_1006
41.3
P10809_1024
51.2
P10809_1043
46.5
P10809_1062
43.9
P10809_1083
33.5
P10809_1097
40.8
Memory CD4 T-cell nTPM: 50.1
Samples: 6
Max nTPM: 60.2
Min nTPM: 38.9
P10809_1014
38.9
P10809_1026
54.6
P10809_1045
60.2
P10809_1064
47.2
P10809_1086
48.7
P10809_1113
50.7
Memory CD8 T-cell nTPM: 50.3
Samples: 5
Max nTPM: 55.8
Min nTPM: 43.7
P10809_1012
43.7
P10809_1027
55.8
P10809_1046
52.8
P10809_1065
51.2
P10809_1111
48.0
Naive CD4 T-cell nTPM: 47.8
Samples: 6
Max nTPM: 63.0
Min nTPM: 32.0
P10809_1015
32.0
P10809_1030
50.8
P10809_1049
63.0
P10809_1068
40.6
P10809_1085
57.7
P10809_1112
42.6
Naive CD8 T-cell nTPM: 51.3
Samples: 6
Max nTPM: 74.1
Min nTPM: 39.1
P10809_1016
39.1
P10809_1031
74.1
P10809_1050
57.3
P10809_1069
46.8
P10809_1087
45.8
P10809_1110
44.8
T-reg nTPM: 71.8
Samples: 6
Max nTPM: 130.5
Min nTPM: 50.3
P10809_1018
61.8
P10809_1037
71.0
P10809_1056
130.5
P10809_1075
55.6
P10809_1094
61.4
P10809_1106
50.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.9
Samples: 4
Max nTPM: 117.6
Min nTPM: 59.5
RHH5202_R3573
75.4
RHH5230_R3602
59.5
RHH5259_R3631
117.6
RHH5288_R3660
71.2
Effector memory CD8 T-cell nTPM: 115.2
Samples: 4
Max nTPM: 140.3
Min nTPM: 92.5
RHH5203_R3574
140.3
RHH5231_R3603
92.5
RHH5260_R3632
130.7
RHH5289_R3661
97.4
MAIT T-cell nTPM: 83.7
Samples: 4
Max nTPM: 93.7
Min nTPM: 75.0
RHH5233_R3605
93.7
RHH5205_R3576
87.0
RHH5262_R3634
79.2
RHH5297_R3663
75.0
Memory CD4 T-cell TFH nTPM: 92.5
Samples: 4
Max nTPM: 100.8
Min nTPM: 78.7
RHH5300_R3666
78.7
RHH5236_R3608
98.7
RHH5265_R3637
91.7
RHH5208_R3579
100.8
Memory CD4 T-cell Th1 nTPM: 94.6
Samples: 4
Max nTPM: 105.3
Min nTPM: 76.4
RHH5210_R3581
76.4
RHH5302_R3668
99.6
RHH5238_R3610
105.3
RHH5267_R3639
97.1
Memory CD4 T-cell Th1/Th17 nTPM: 85.7
Samples: 4
Max nTPM: 117.6
Min nTPM: 65.7
RHH5303_R3669
73.4
RHH5211_R3582
86.2
RHH5239_R3611
117.6
RHH5268_R3640
65.7
Memory CD4 T-cell Th17 nTPM: 102.5
Samples: 4
Max nTPM: 120.9
Min nTPM: 93.0
RHH5304_R3670
103.1
RHH5212_R3583
93.0
RHH5240_R3612
120.9
RHH5269_R3641
93.0
Memory CD4 T-cell Th2 nTPM: 98.2
Samples: 4
Max nTPM: 112.9
Min nTPM: 87.2
RHH5305_R3671
101.5
RHH5213_R3584
112.9
RHH5241_R3613
87.2
RHH5270_R3642
91.1
Naive CD4 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 104.9
Min nTPM: 76.9
RHH5306_R3672
104.9
RHH5214_R3585
94.8
RHH5242_R3614
84.2
RHH5271_R3643
76.9
Naive CD8 T-cell nTPM: 93.0
Samples: 4
Max nTPM: 123.0
Min nTPM: 74.5
RHH5201_R3572
74.5
RHH5229_R3601
123.0
RHH5258_R3630
88.5
RHH5287_R3659
86.1
Non-Vd2 gdTCR nTPM: 111.6
Samples: 4
Max nTPM: 130.7
Min nTPM: 93.7
RHH5235_R3607
115.6
RHH5264_R3636
106.2
RHH5207_R3578
130.7
RHH5299_R3665
93.7
T-reg nTPM: 112.2
Samples: 4
Max nTPM: 118.6
Min nTPM: 104.0
RHH5301_R3667
104.0
RHH5237_R3609
118.6
RHH5266_R3638
114.2
RHH5209_R3580
112.0
Terminal effector memory CD4 T-cell nTPM: 102.3
Samples: 2
Max nTPM: 119.9
Min nTPM: 84.6
RHH5243_R3615
84.6
RHH5272_R3644
119.9
Terminal effector memory CD8 T-cell nTPM: 100.4
Samples: 4
Max nTPM: 139.1
Min nTPM: 76.3
RHH5232_R3604
94.6
RHH5204_R3575
76.3
RHH5261_R3633
139.1
RHH5296_R3662
91.6
Vd2 gdTCR nTPM: 89.4
Samples: 4
Max nTPM: 107.7
Min nTPM: 75.5
RHH5234_R3606
90.8
RHH5206_R3577
83.5
RHH5263_R3635
107.7
RHH5298_R3664
75.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
