HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:15.9 nTPM
HPA Brain:124.4 nTPM
GTEx:15.9 nTPM
FANTOM5:125.1 Scaled Tags Per Million
Pig:96.6 nTPM
Mouse:201.9 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029755Antibody HPA029756Antibody HPA029757
Glial cells Not detectedNot detectedLow
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.4
Sample id Sample description nTPM
Hippocampus
nTPM: 96.4
2621 Female, age 67, right hemisphere 111.7
1855 Male, age 76, left hemisphere 104.3
1898 Male, age 80, left hemisphere 104.2
1911 Female, age 85, right hemisphere 91.9
2148 Female, age 91, left hemisphere 91.0
2529 Female, age 94, left hemisphere 75.5
Dentate gyrus
nTPM: 88.7
1927 Female, age 91, both hemispheres 114.0
2531 Female, age 67, both hemispheres 101.0
2010 Male, age 76, both hemispheres 91.7
2246 Female, age 85, both hemispheres 86.0
2530 Female, age 94, left hemisphere 76.5
2528 Male, age 74, both hemispheres 63.2
Entorhinal gyrus
nTPM: 99.5
2613 Female, age 94, left hemisphere 118.7
2764 Male, age 80, right hemisphere 110.0
1787 Male, age 76, left hemisphere 109.3
1938 Female, age 85, left hemisphere 103.1
2686 Male, age 75, right hemisphere 85.3
2117 Female, age 91, right hemisphere 70.6
Hippocampus, CA1
nTPM: 107.6
2749 Male, age 80, left hemisphere 169.9
2527 Male, age 74, both hemispheres 97.6
2045 Male, age 76, both hemispheres 95.9
1873 Female, age 85, both hemispheres 93.6
2082 Female, age 91, right hemisphere 81.0
Hippocampus, CA2
nTPM: 93.1
1963 Male, age 80, left hemisphere 129.4
1892 Male, age 76, both hemispheres 114.4
2113 Female, age 91, right hemisphere 90.2
2437 Female, age 94, left hemisphere 82.4
1940 Female, age 85, left hemisphere 73.4
2249 Male, age 74, both hemispheres 68.5
Hippocampus, CA3
nTPM: 103.3
2137 Male, age 80, left hemisphere 177.5
2861 Female, age 67, both hemispheres 108.6
1867 Male, age 76, both hemispheres 94.7
2620 Female, age 94, left hemisphere 90.3
1891 Female, age 85, both hemispheres 76.3
2436 Male, age 74, both hemispheres 72.6
Parahippocampal cortex
nTPM: 103.8
2245 Female, age 91, both hemispheres 150.5
1850 Male, age 80, both hemispheres 122.6
2532 Female, age 72, left hemisphere 107.3
2018 Male, age 76, both hemispheres 105.0
2693 Female, age 94, both hemispheres 101.5
1933 Female, age 85, both hemispheres 99.4
2622 Female, age 67, right hemisphere 96.6
1990 Female, age 91, right hemisphere 92.1
2250 Female, age 67, right hemisphere 89.6
2692 Male, age 74, both hemispheres 72.9
Perirhinal gyrus
nTPM: 124.4
1847 Female, age 91, left hemisphere 129.8
2521 Female, age 94, right hemisphere 126.3
1794 Male, age 80, right hemisphere 125.7
1841 Female, age 85, right hemisphere 120.6
2848 Male, age 76, right hemisphere 119.9
Subiculum
nTPM: 77.4
1901 Male, age 80, both hemispheres 97.6
1977 Female, age 85, both hemispheres 83.0
2042 Male, age 76, both hemispheres 76.7
2438 Female, age 94, left hemisphere 71.9
2619 Male, age 74, both hemispheres 68.7
2729 Female, age 91, right hemisphere 66.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 50.5
Min nTPM: 2.2
Std nTPM: 9.0
Median nTPM: 14.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 50.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 44.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 40.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 38.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 37.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 35.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 34.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 33.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.1
FF:10169-103B7 60 years, female 159.9
FF:10153-102I9 76 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.6
Pig sample Sample description nTPM
Subiculum
nTPM: 71.7
Samples: 4

Max nTPM: 96.4
Min nTPM: 57.6
Sample A Female 96.4
Sample B Female 69.3
Sample C Male 63.3
Sample D Male 57.6
Dorsal hippocampus
nTPM: 75.4
Samples: 4

Max nTPM: 88.9
Min nTPM: 62.6
Sample A Female 88.9
Sample B Female 77.3
Sample C Male 72.7
Sample D Male 62.6
Entorhinal cortex
nTPM: 96.6
Samples: 4

Max nTPM: 98.3
Min nTPM: 94.2
Sample A Female 97.7
Sample B Female 96.2
Sample C Male 98.3
Sample D Male 94.2
Ventral hippocampus
nTPM: 62.8
Samples: 4

Max nTPM: 83.5
Min nTPM: 46.1
Sample A Female 46.1
Sample B Female 51.6
Sample C Male 70.0
Sample D Male 83.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 201.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 202.0
Samples: 4

Max nTPM: 211.0
Min nTPM: 184.6
Sample A Male 210.2
Sample B Male 202.0
Sample C Female 184.6
Sample D Female 211.0
Hippocampal formation
nTPM: 141.7
Samples: 4

Max nTPM: 162.0
Min nTPM: 133.1
Sample A Male 162.0
Sample B Male 136.9
Sample C Female 133.1
Sample D Female 134.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
71920511 Antisense, RP_051017_02_G04, Mouse strain C57BL/6J (56 days, male) 9.8
68798055 Antisense, RP_050215_01_F10, Mouse strain C57BL/6J (56 days, male) 9.7

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