HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:35.5 nTPM
HPA Brain:35.8 nTPM
GTEx:35.5 nTPM
FANTOM5:92.8 Scaled Tags Per Million
Pig:67.7 nTPM
Mouse:1.3 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003281
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.8
Sample id Sample description nTPM
Hippocampus
nTPM: 26.6
1855 Male, age 76, left hemisphere 37.4
1898 Male, age 80, left hemisphere 33.4
2529 Female, age 94, left hemisphere 27.9
1911 Female, age 85, right hemisphere 24.4
2621 Female, age 67, right hemisphere 18.5
2148 Female, age 91, left hemisphere 17.8
Dentate gyrus
nTPM: 27.8
2010 Male, age 76, both hemispheres 45.5
2530 Female, age 94, left hemisphere 31.8
2528 Male, age 74, both hemispheres 29.4
2246 Female, age 85, both hemispheres 24.4
1927 Female, age 91, both hemispheres 21.7
2531 Female, age 67, both hemispheres 14.3
Entorhinal gyrus
nTPM: 27.8
1938 Female, age 85, left hemisphere 36.1
2117 Female, age 91, right hemisphere 35.4
2686 Male, age 75, right hemisphere 32.2
1787 Male, age 76, left hemisphere 26.5
2764 Male, age 80, right hemisphere 20.2
2613 Female, age 94, left hemisphere 16.6
Hippocampus, CA1
nTPM: 35.8
2045 Male, age 76, both hemispheres 50.9
2749 Male, age 80, left hemisphere 43.6
2527 Male, age 74, both hemispheres 31.8
2082 Female, age 91, right hemisphere 27.2
1873 Female, age 85, both hemispheres 25.8
Hippocampus, CA2
nTPM: 31.3
2249 Male, age 74, both hemispheres 47.7
1892 Male, age 76, both hemispheres 35.8
1940 Female, age 85, left hemisphere 32.4
2113 Female, age 91, right hemisphere 25.5
1963 Male, age 80, left hemisphere 23.8
2437 Female, age 94, left hemisphere 22.4
Hippocampus, CA3
nTPM: 30.4
2436 Male, age 74, both hemispheres 50.1
1867 Male, age 76, both hemispheres 44.8
2137 Male, age 80, left hemisphere 34.3
1891 Female, age 85, both hemispheres 23.2
2620 Female, age 94, left hemisphere 17.0
2861 Female, age 67, both hemispheres 12.8
Parahippocampal cortex
nTPM: 29.9
2018 Male, age 76, both hemispheres 40.8
1850 Male, age 80, both hemispheres 36.4
2692 Male, age 74, both hemispheres 33.9
2250 Female, age 67, right hemisphere 33.0
2693 Female, age 94, both hemispheres 31.7
1990 Female, age 91, right hemisphere 30.0
1933 Female, age 85, both hemispheres 29.2
2532 Female, age 72, left hemisphere 28.0
2622 Female, age 67, right hemisphere 20.1
2245 Female, age 91, both hemispheres 16.3
Perirhinal gyrus
nTPM: 27.4
1841 Female, age 85, right hemisphere 29.5
1847 Female, age 91, left hemisphere 29.4
2521 Female, age 94, right hemisphere 28.9
2848 Male, age 76, right hemisphere 28.1
1794 Male, age 80, right hemisphere 20.9
Subiculum
nTPM: 28.2
2042 Male, age 76, both hemispheres 48.5
1977 Female, age 85, both hemispheres 35.3
1901 Male, age 80, both hemispheres 33.1
2729 Female, age 91, right hemisphere 24.7
2438 Female, age 94, left hemisphere 14.8
2619 Male, age 74, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.5
Samples: 197

Max nTPM: 118.8
Min nTPM: 17.6
Std nTPM: 12.0
Median nTPM: 32.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 118.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 74.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 71.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 70.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 66.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 64.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 61.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 59.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 59.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 58.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 58.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.8
FF:10153-102I9 76 years, female 102.5
FF:10169-103B7 60 years, female 83.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.7
Pig sample Sample description nTPM
Subiculum
nTPM: 67.7
Samples: 4

Max nTPM: 82.4
Min nTPM: 60.0
Sample A Female 82.4
Sample B Female 65.1
Sample C Male 60.0
Sample D Male 63.3
Dorsal hippocampus
nTPM: 65.1
Samples: 4

Max nTPM: 84.1
Min nTPM: 46.6
Sample A Female 84.1
Sample B Female 58.2
Sample C Male 71.6
Sample D Male 46.6
Entorhinal cortex
nTPM: 63.6
Samples: 4

Max nTPM: 72.2
Min nTPM: 52.7
Sample A Female 59.0
Sample B Female 72.2
Sample C Male 70.5
Sample D Male 52.7
Ventral hippocampus
nTPM: 58.9
Samples: 4

Max nTPM: 65.4
Min nTPM: 52.8
Sample A Female 65.4
Sample B Female 52.8
Sample C Male 63.8
Sample D Male 53.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.4
Sample A Male 0.8
Sample B Male 0.9
Sample C Female 0.4
Sample D Female 0.8
Hippocampal formation
nTPM: 1.3
Samples: 4

Max nTPM: 2.5
Min nTPM: 0.4
Sample A Male 0.4
Sample B Male 1.2
Sample C Female 2.5
Sample D Female 1.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
75079765 Antisense, RP_060412_02_F03, Mouse strain C57BL/6J (56 days, male) 7.2
69014440 Antisense, RP_050310_01_B03, Mouse strain C57BL/6J (56 days, male) 5.8
Hippocampal formation
Expression energy: 6.5
75079765 Antisense, RP_060412_02_F03, Mouse strain C57BL/6J (56 days, male) 7.2
69014440 Antisense, RP_050310_01_B03, Mouse strain C57BL/6J (56 days, male) 5.8

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