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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.5
nTPM
Monaco:
146.7
nTPM
Schmiedel:
89.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.5
HPA sample
nTPM
gdT-cell nTPM: 24.6
Samples: 6
Max nTPM: 39.6
Min nTPM: 15.3
P10809_1007
15.3
P10809_1022
26.1
P10809_1041
21.3
P10809_1060
27.8
P10809_1077
39.6
P10809_1098
17.7
MAIT T-cell nTPM: 10.3
Samples: 6
Max nTPM: 15.9
Min nTPM: 6.1
P10809_1006
10.2
P10809_1024
15.9
P10809_1043
8.1
P10809_1062
12.6
P10809_1083
9.1
P10809_1097
6.1
Memory CD4 T-cell nTPM: 8.4
Samples: 6
Max nTPM: 10.6
Min nTPM: 6.9
P10809_1014
10.6
P10809_1026
6.9
P10809_1045
8.1
P10809_1064
8.9
P10809_1086
9.0
P10809_1113
7.0
Memory CD8 T-cell nTPM: 29.0
Samples: 5
Max nTPM: 35.4
Min nTPM: 23.3
P10809_1012
23.3
P10809_1027
25.2
P10809_1046
32.6
P10809_1065
28.4
P10809_1111
35.4
Naive CD4 T-cell nTPM: 27.1
Samples: 6
Max nTPM: 37.2
Min nTPM: 15.8
P10809_1015
23.1
P10809_1030
26.4
P10809_1049
36.5
P10809_1068
37.2
P10809_1085
15.8
P10809_1112
23.8
Naive CD8 T-cell nTPM: 39.5
Samples: 6
Max nTPM: 56.6
Min nTPM: 28.7
P10809_1016
28.7
P10809_1031
56.6
P10809_1050
43.6
P10809_1069
38.8
P10809_1087
39.0
P10809_1110
30.4
T-reg nTPM: 6.1
Samples: 6
Max nTPM: 11.4
Min nTPM: 3.8
P10809_1018
6.4
P10809_1037
5.8
P10809_1056
11.4
P10809_1075
4.9
P10809_1094
3.8
P10809_1106
4.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
146.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.3
Samples: 4
Max nTPM: 128.2
Min nTPM: 65.3
RHH5202_R3573
85.2
RHH5230_R3602
65.3
RHH5259_R3631
90.6
RHH5288_R3660
128.2
Effector memory CD8 T-cell nTPM: 146.7
Samples: 4
Max nTPM: 185.6
Min nTPM: 121.2
RHH5203_R3574
145.9
RHH5231_R3603
121.2
RHH5260_R3632
134.2
RHH5289_R3661
185.6
MAIT T-cell nTPM: 42.2
Samples: 4
Max nTPM: 56.0
Min nTPM: 25.7
RHH5233_R3605
56.0
RHH5205_R3576
35.1
RHH5262_R3634
51.8
RHH5297_R3663
25.7
Memory CD4 T-cell TFH nTPM: 64.9
Samples: 4
Max nTPM: 79.8
Min nTPM: 55.3
RHH5300_R3666
58.9
RHH5236_R3608
65.4
RHH5265_R3637
79.8
RHH5208_R3579
55.3
Memory CD4 T-cell Th1 nTPM: 54.0
Samples: 4
Max nTPM: 57.1
Min nTPM: 47.2
RHH5210_R3581
55.3
RHH5302_R3668
56.3
RHH5238_R3610
47.2
RHH5267_R3639
57.1
Memory CD4 T-cell Th1/Th17 nTPM: 17.9
Samples: 4
Max nTPM: 27.3
Min nTPM: 9.0
RHH5303_R3669
18.0
RHH5211_R3582
9.0
RHH5239_R3611
17.4
RHH5268_R3640
27.3
Memory CD4 T-cell Th17 nTPM: 19.2
Samples: 4
Max nTPM: 26.2
Min nTPM: 7.9
RHH5304_R3670
24.7
RHH5212_R3583
7.9
RHH5240_R3612
26.2
RHH5269_R3641
18.1
Memory CD4 T-cell Th2 nTPM: 35.2
Samples: 4
Max nTPM: 61.8
Min nTPM: 23.5
RHH5305_R3671
61.8
RHH5213_R3584
23.5
RHH5241_R3613
29.7
RHH5270_R3642
25.9
Naive CD4 T-cell nTPM: 101.7
Samples: 4
Max nTPM: 114.9
Min nTPM: 85.2
RHH5306_R3672
85.2
RHH5214_R3585
112.5
RHH5242_R3614
94.3
RHH5271_R3643
114.9
Naive CD8 T-cell nTPM: 138.7
Samples: 4
Max nTPM: 148.0
Min nTPM: 119.3
RHH5201_R3572
148.0
RHH5229_R3601
119.3
RHH5258_R3630
140.2
RHH5287_R3659
147.3
Non-Vd2 gdTCR nTPM: 142.9
Samples: 4
Max nTPM: 213.0
Min nTPM: 94.6
RHH5235_R3607
119.4
RHH5264_R3636
213.0
RHH5207_R3578
94.6
RHH5299_R3665
144.4
T-reg nTPM: 65.9
Samples: 4
Max nTPM: 74.3
Min nTPM: 56.2
RHH5301_R3667
60.4
RHH5237_R3609
72.8
RHH5266_R3638
74.3
RHH5209_R3580
56.2
Terminal effector memory CD4 T-cell nTPM: 85.7
Samples: 2
Max nTPM: 86.9
Min nTPM: 84.4
RHH5243_R3615
84.4
RHH5272_R3644
86.9
Terminal effector memory CD8 T-cell nTPM: 145.7
Samples: 4
Max nTPM: 164.0
Min nTPM: 125.8
RHH5232_R3604
132.8
RHH5204_R3575
125.8
RHH5261_R3633
164.0
RHH5296_R3662
160.0
Vd2 gdTCR nTPM: 76.7
Samples: 4
Max nTPM: 113.4
Min nTPM: 53.6
RHH5234_R3606
83.9
RHH5206_R3577
55.7
RHH5263_R3635
113.4
RHH5298_R3664
53.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
