HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:7.0 nTPM
HPA Brain:10.8 nTPM
GTEx:7.0 nTPM
FANTOM5:69.5 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:156.0 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019881Antibody HPA057134
Glial cells LowNot detected
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.8
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1898 Male, age 80, left hemisphere 11.0
1855 Male, age 76, left hemisphere 10.6
1911 Female, age 85, right hemisphere 10.6
2148 Female, age 91, left hemisphere 10.4
2529 Female, age 94, left hemisphere 10.4
2621 Female, age 67, right hemisphere 9.6
Dentate gyrus
nTPM: 9.8
2528 Male, age 74, both hemispheres 11.9
1927 Female, age 91, both hemispheres 10.2
2246 Female, age 85, both hemispheres 10.1
2010 Male, age 76, both hemispheres 9.8
2530 Female, age 94, left hemisphere 8.7
2531 Female, age 67, both hemispheres 8.0
Entorhinal gyrus
nTPM: 9.4
1938 Female, age 85, left hemisphere 10.5
2117 Female, age 91, right hemisphere 10.5
2764 Male, age 80, right hemisphere 9.5
1787 Male, age 76, left hemisphere 9.1
2613 Female, age 94, left hemisphere 8.6
2686 Male, age 75, right hemisphere 8.1
Hippocampus, CA1
nTPM: 10.8
2749 Male, age 80, left hemisphere 12.8
2527 Male, age 74, both hemispheres 12.5
2082 Female, age 91, right hemisphere 10.7
1873 Female, age 85, both hemispheres 9.6
2045 Male, age 76, both hemispheres 8.2
Hippocampus, CA2
nTPM: 10.2
1963 Male, age 80, left hemisphere 11.1
2113 Female, age 91, right hemisphere 10.8
2249 Male, age 74, both hemispheres 10.5
1892 Male, age 76, both hemispheres 10.0
1940 Female, age 85, left hemisphere 9.6
2437 Female, age 94, left hemisphere 9.2
Hippocampus, CA3
nTPM: 10.2
2137 Male, age 80, left hemisphere 12.6
2436 Male, age 74, both hemispheres 10.9
1891 Female, age 85, both hemispheres 10.8
2620 Female, age 94, left hemisphere 9.5
1867 Male, age 76, both hemispheres 9.2
2861 Female, age 67, both hemispheres 8.4
Parahippocampal cortex
nTPM: 10.2
2692 Male, age 74, both hemispheres 11.6
1850 Male, age 80, both hemispheres 10.7
1990 Female, age 91, right hemisphere 10.7
1933 Female, age 85, both hemispheres 10.5
2250 Female, age 67, right hemisphere 10.5
2245 Female, age 91, both hemispheres 9.9
2532 Female, age 72, left hemisphere 9.9
2693 Female, age 94, both hemispheres 9.8
2622 Female, age 67, right hemisphere 9.5
2018 Male, age 76, both hemispheres 9.4
Perirhinal gyrus
nTPM: 10.1
1847 Female, age 91, left hemisphere 11.4
1794 Male, age 80, right hemisphere 10.1
2521 Female, age 94, right hemisphere 10.1
1841 Female, age 85, right hemisphere 9.8
2848 Male, age 76, right hemisphere 9.2
Subiculum
nTPM: 10.2
2619 Male, age 74, both hemispheres 11.2
1901 Male, age 80, both hemispheres 10.9
2729 Female, age 91, right hemisphere 10.8
1977 Female, age 85, both hemispheres 10.0
2438 Female, age 94, left hemisphere 9.6
2042 Male, age 76, both hemispheres 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.0
Samples: 197

Max nTPM: 13.8
Min nTPM: 3.8
Std nTPM: 1.4
Median nTPM: 7.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 13.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 11.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 11.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 10.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 10.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 10.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 10.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 9.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 9.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 9.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 9.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.5
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 58.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 10.7
Min nTPM: 10.0
Sample A Female 10.5
Sample B Female 10.7
Sample C Male 10.0
Sample D Male 10.6
Dorsal hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.3
Sample A Female 9.8
Sample B Female 9.3
Sample C Male 10.4
Sample D Male 10.9
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.3
Sample A Female 9.9
Sample B Female 11.1
Sample C Male 9.3
Sample D Male 11.4
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.7
Sample A Female 11.6
Sample B Female 12.0
Sample C Male 8.7
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 156.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 128.9
Samples: 4

Max nTPM: 139.7
Min nTPM: 112.5
Sample A Male 131.3
Sample B Male 132.1
Sample C Female 139.7
Sample D Female 112.5
Hippocampal formation
nTPM: 156.0
Samples: 4

Max nTPM: 168.5
Min nTPM: 148.4
Sample A Male 168.5
Sample B Male 148.4
Sample C Female 156.1
Sample D Female 151.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
79393539 Antisense, RP_071018_02_B04, Mouse strain C57BL/6J (56 days, male) 4.9
75042252 Antisense, RP_060412_02_C06, Mouse strain C57BL/6J (56 days, male) 2.5

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