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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
433.1
nTPM
FANTOM5:
404.5
Scaled Tags Per Million
Pig:
455.3
nTPM
Allen mouse:
3.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
433.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 401.9
2188
Female, age 91, both hemispheres
500.4
2090
Male, age 80, both hemispheres
473.0
2301
Female, age 85, both hemispheres
335.3
1984
Male, age 76, both hemispheres
298.7
Dorsal cochlear nucleus nTPM: 430.6
2802
Male, age 74, right hemisphere
506.2
2187
Female, age 91, both hemispheres
462.7
2370
Male, age 61, both hemispheres
453.8
2378
Male, age 80, both hemispheres
445.0
2058
Male, age 76, both hemispheres
285.2
Dorsal tegmental nucleus nTPM: 400.4
2326
Male, age 74, both hemispheres
457.2
2083
Male, age 80, both hemispheres
448.3
2358
Male, age 61, both hemispheres
378.5
1936
Male, age 76, left hemisphere
317.8
Dorsolateral tegmental area nTPM: 386.6
2654
Male, age 80, both hemispheres
476.9
2337
Male, age 61, both hemispheres
409.4
2751
Female, age 85, both hemispheres
403.0
2360
Male, age 74, both hemispheres
373.1
2141
Male, age 76, both hemispheres
270.6
Kolliker-Fuse nucleus nTPM: 384.6
2315
Male, age 76, right hemisphere
409.4
2793
Female, age 91, left hemisphere
392.2
2163
Male, age 80, both hemispheres
352.3
Lateral lemniscal nuclei nTPM: 285.8
2453
Male, age 74, right hemisphere
317.5
2320
Female, age 91, left hemisphere
291.2
2746
Female, age 85, left hemisphere
288.0
2169
Male, age 76, both hemispheres
281.2
2036
Male, age 80, both hemispheres
251.3
Lateral parabrachial nucleus nTPM: 392.3
2792
Male, age 76, both hemispheres
485.2
2013
Male, age 80, both hemispheres
426.2
2790
Male, age 61, both hemispheres
333.3
2139
Female, age 85, right hemisphere
324.6
Lateral vestibular nucleus nTPM: 343.8
2311
Male, age 80, both hemispheres
418.4
2184
Male, age 76, both hemispheres
269.2
Locus coeruleus nTPM: 297.0
2720
Male, age 74, both hemispheres
346.3
2162
Male, age 80, both hemispheres
335.4
2123
Female, age 91, both hemispheres
315.9
2317
Female, age 72, unknown
308.6
2014
Male, age 55, unknown
282.0
1980
Male, age 76, both hemispheres
249.7
2788
Male, age 74, unknown
241.3
Medial parabrachial nucleus nTPM: 374.0
2170
Female, age 91, both hemispheres
540.5
2854
Male, age 80, both hemispheres
361.3
2463
Female, age 85, right hemisphere
354.0
2156
Male, age 61, both hemispheres
320.4
2786
Male, age 76, both hemispheres
293.6
Medial periolivary nuclei nTPM: 308.5
2458
Female, age 91, both hemispheres
347.0
2081
Male, age 80, both hemispheres
345.7
2791
Male, age 74, right hemisphere
313.3
2063
Male, age 76, both hemispheres
308.7
2171
Female, age 85, both hemispheres
228.0
Motor facial nucleus nTPM: 307.1
2795
Female, age 91, both hemispheres
356.7
2126
Male, age 61, both hemispheres
355.4
2365
Male, age 74, right hemisphere
334.0
2697
Female, age 85, both hemispheres
323.0
2062
Male, age 76, both hemispheres
248.3
2327
Male, age 80, both hemispheres
225.2
Motor trigeminal nucleus nTPM: 343.9
2560
Male, age 74, both hemispheres
386.9
2321
Female, age 91, both hemispheres
382.3
2335
Male, age 61, both hemispheres
365.9
2309
Male, age 76, both hemispheres
313.2
2079
Male, age 80, both hemispheres
271.3
Nuclei of the trapezoid body nTPM: 291.9
2166
Male, age 80, both hemispheres
338.8
1983
Male, age 76, both hemispheres
323.9
2368
Female, age 91, both hemispheres
322.9
2159
Male, age 61, both hemispheres
275.5
2735
Female, age 85, both hemispheres
198.5
Nucleus raphe magnus nTPM: 282.6
2459
Female, age 91, both hemispheres
338.9
2051
Male, age 76, both hemispheres
306.4
2328
Male, age 80, both hemispheres
297.9
2455
Male, age 74, both hemispheres
277.8
2160
Male, age 61, both hemispheres
247.7
2172
Female, age 85, both hemispheres
226.9
Paramedian reticular nucleus nTPM: 356.6
2052
Male, age 76, both hemispheres
413.8
2313
Male, age 61, both hemispheres
344.1
2057
Male, age 80, both hemispheres
341.0
2050
Female, age 85, both hemispheres
327.5
Pedunculopontine tegmental nucleus nTPM: 350.8
2334
Male, age 80, both hemispheres
402.6
2338
Male, age 61, both hemispheres
385.5
1921
Female, age 85, both hemispheres
264.4
Pontine nuclei nTPM: 333.4
2319
Female, age 91, both hemispheres
420.7
2454
Male, age 74, left hemisphere
375.1
1863
Male, age 55, unknown
340.9
2115
Male, age 80, left hemisphere
336.2
2787
Female, age 85, both hemispheres
325.0
2109
Female, age 72, unknown
313.9
1968
Male, age 76, left hemisphere
296.9
2727
Male, age 61, right hemisphere
258.5
Pontine raphe nucleus nTPM: 294.0
2853
Male, age 76, midline
294.6
2122
Female, age 85, midline
293.4
Posteroventral cochlear nucleus nTPM: 433.1
2341
Male, age 80, both hemispheres
574.3
2135
Female, age 91, both hemispheres
493.4
2371
Male, age 61, both hemispheres
469.7
2752
Female, age 85, both hemispheres
315.5
2070
Male, age 76, both hemispheres
312.7
Principal sensory trigeminal nucleus nTPM: 288.1
2367
Female, age 91, left hemisphere
379.1
2158
Male, age 61, both hemispheres
277.7
2324
Male, age 76, both hemispheres
255.9
2008
Male, age 80, left hemisphere
239.6
Reticular pontine nucleus, caudal nTPM: 362.3
2559
Male, age 74, both hemispheres
448.3
2457
Female, age 91, both hemispheres
400.2
2092
Male, age 76, both hemispheres
360.7
2332
Male, age 80, right hemisphere
240.1
Reticular pontine nucleus, oral nTPM: 387.3
2366
Female, age 91, both hemispheres
472.9
2361
Male, age 74, both hemispheres
428.5
1939
Male, age 80, both hemispheres
393.3
2167
Male, age 76, both hemispheres
337.7
2012
Female, age 85, both hemispheres
304.1
Reticulotegmental nucleus nTPM: 356.4
2452
Male, age 74, both hemispheres
451.8
2322
Female, age 91, both hemispheres
375.0
2333
Male, age 80, both hemispheres
326.3
2325
Male, age 76, both hemispheres
272.7
Spinal trigeminal nucleus, oral nTPM: 304.3
2164
Male, age 80, both hemispheres
350.1
1978
Male, age 76, both hemispheres
296.4
2737
Female, age 85, both hemispheres
266.3
Subcoeruleus area nTPM: 361.3
2451
Male, age 74, both hemispheres
483.9
2369
Female, age 85, left hemisphere
434.9
1958
Male, age 80, both hemispheres
336.1
2323
Female, age 91, left hemisphere
290.7
2089
Male, age 76, left hemisphere
260.7
Superior olive nTPM: 326.2
2561
Female, age 91, both hemispheres
384.6
2020
Male, age 76, both hemispheres
363.9
2364
Male, age 74, right hemisphere
339.1
1875
Female, age 85, both hemispheres
272.1
2329
Male, age 80, right hemisphere
271.4
Ventral periolivary nuclei nTPM: 302.3
2023
Male, age 76, both hemispheres
381.6
2794
Female, age 91, left hemisphere
354.5
2165
Male, age 80, both hemispheres
304.4
2130
Female, age 85, both hemispheres
168.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 325.6
2359
Male, age 61, both hemispheres
363.3
2161
Male, age 80, both hemispheres
345.2
2456
Female, age 91, both hemispheres
327.7
2840
Female, age 85, both hemispheres
317.3
2449
Male, age 74, both hemispheres
300.4
1959
Male, age 76, both hemispheres
299.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
455.3
Pig sample
Sample description
nTPM
Pons nTPM: 455.3
Samples: 4
Max nTPM: 605.8
Min nTPM: 348.5
Sample A
Female
373.0
Sample B
Female
348.5
Sample C
Male
605.8
Sample D
Male
493.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
