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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
5218.5
nTPM
Monaco:
1664.7
nTPM
Schmiedel:
7427.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5218.5
HPA sample
nTPM
gdT-cell nTPM: 2419.4
Samples: 6
Max nTPM: 3132.9
Min nTPM: 1619.4
P10809_1007
3132.9
P10809_1022
2516.6
P10809_1041
2346.9
P10809_1060
1619.4
P10809_1077
2538.9
P10809_1098
2361.5
MAIT T-cell nTPM: 3738.1
Samples: 6
Max nTPM: 4456.7
Min nTPM: 3467.2
P10809_1006
3467.2
P10809_1024
3707.0
P10809_1043
3660.2
P10809_1062
3660.1
P10809_1083
3477.1
P10809_1097
4456.7
Memory CD4 T-cell nTPM: 4225.1
Samples: 6
Max nTPM: 5531.1
Min nTPM: 3096.2
P10809_1014
5531.1
P10809_1026
4486.5
P10809_1045
4592.1
P10809_1064
3096.2
P10809_1086
3532.5
P10809_1113
4112.4
Memory CD8 T-cell nTPM: 3132.8
Samples: 5
Max nTPM: 3839.6
Min nTPM: 2419.9
P10809_1012
3839.6
P10809_1027
2742.3
P10809_1046
3617.9
P10809_1065
2419.9
P10809_1111
3044.3
Naive CD4 T-cell nTPM: 5218.5
Samples: 6
Max nTPM: 7108.0
Min nTPM: 4279.0
P10809_1015
7108.0
P10809_1030
5492.7
P10809_1049
4649.9
P10809_1068
4884.0
P10809_1085
4279.0
P10809_1112
4897.4
Naive CD8 T-cell nTPM: 4469.9
Samples: 6
Max nTPM: 8723.4
Min nTPM: 2728.5
P10809_1016
8723.4
P10809_1031
4022.1
P10809_1050
4073.0
P10809_1069
3091.3
P10809_1087
2728.5
P10809_1110
4181.1
T-reg nTPM: 2528.0
Samples: 6
Max nTPM: 3089.2
Min nTPM: 2300.6
P10809_1018
2349.0
P10809_1037
2568.9
P10809_1056
2383.3
P10809_1075
2477.0
P10809_1094
3089.2
P10809_1106
2300.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1664.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1232.9
Samples: 4
Max nTPM: 1744.4
Min nTPM: 618.3
RHH5202_R3573
618.3
RHH5230_R3602
1744.4
RHH5259_R3631
1693.8
RHH5288_R3660
874.9
Effector memory CD8 T-cell nTPM: 389.5
Samples: 4
Max nTPM: 677.3
Min nTPM: 260.5
RHH5203_R3574
340.9
RHH5231_R3603
279.3
RHH5260_R3632
677.3
RHH5289_R3661
260.5
MAIT T-cell nTPM: 1023.2
Samples: 4
Max nTPM: 1220.7
Min nTPM: 698.4
RHH5233_R3605
698.4
RHH5205_R3576
1220.7
RHH5262_R3634
1186.8
RHH5297_R3663
986.8
Memory CD4 T-cell TFH nTPM: 783.0
Samples: 4
Max nTPM: 973.4
Min nTPM: 673.5
RHH5300_R3666
973.4
RHH5236_R3608
689.6
RHH5265_R3637
795.5
RHH5208_R3579
673.5
Memory CD4 T-cell Th1 nTPM: 1395.0
Samples: 4
Max nTPM: 2019.6
Min nTPM: 626.2
RHH5210_R3581
626.2
RHH5302_R3668
1479.1
RHH5238_R3610
2019.6
RHH5267_R3639
1455.2
Memory CD4 T-cell Th1/Th17 nTPM: 1110.5
Samples: 4
Max nTPM: 1587.0
Min nTPM: 612.5
RHH5303_R3669
751.1
RHH5211_R3582
612.5
RHH5239_R3611
1587.0
RHH5268_R3640
1491.5
Memory CD4 T-cell Th17 nTPM: 1111.3
Samples: 4
Max nTPM: 1655.7
Min nTPM: 696.9
RHH5304_R3670
1655.7
RHH5212_R3583
696.9
RHH5240_R3612
949.9
RHH5269_R3641
1142.6
Memory CD4 T-cell Th2 nTPM: 1327.9
Samples: 4
Max nTPM: 2123.2
Min nTPM: 976.2
RHH5305_R3671
2123.2
RHH5213_R3584
976.2
RHH5241_R3613
1078.5
RHH5270_R3642
1133.6
Naive CD4 T-cell nTPM: 1664.7
Samples: 4
Max nTPM: 2395.5
Min nTPM: 1226.1
RHH5306_R3672
2395.5
RHH5214_R3585
1414.6
RHH5242_R3614
1226.1
RHH5271_R3643
1622.6
Naive CD8 T-cell nTPM: 1494.9
Samples: 4
Max nTPM: 2085.5
Min nTPM: 885.2
RHH5201_R3572
885.2
RHH5229_R3601
1977.5
RHH5258_R3630
1031.4
RHH5287_R3659
2085.5
Non-Vd2 gdTCR nTPM: 573.5
Samples: 4
Max nTPM: 830.3
Min nTPM: 372.5
RHH5235_R3607
830.3
RHH5264_R3636
372.5
RHH5207_R3578
493.0
RHH5299_R3665
598.2
T-reg nTPM: 994.6
Samples: 4
Max nTPM: 1259.5
Min nTPM: 478.1
RHH5301_R3667
1259.5
RHH5237_R3609
478.1
RHH5266_R3638
1207.7
RHH5209_R3580
1033.2
Terminal effector memory CD4 T-cell nTPM: 611.3
Samples: 2
Max nTPM: 751.9
Min nTPM: 470.7
RHH5243_R3615
751.9
RHH5272_R3644
470.7
Terminal effector memory CD8 T-cell nTPM: 674.3
Samples: 4
Max nTPM: 1027.1
Min nTPM: 311.2
RHH5232_R3604
311.2
RHH5204_R3575
1027.1
RHH5261_R3633
801.8
RHH5296_R3662
556.9
Vd2 gdTCR nTPM: 1191.9
Samples: 4
Max nTPM: 1665.2
Min nTPM: 852.7
RHH5234_R3606
852.7
RHH5206_R3577
1665.2
RHH5263_R3635
1078.6
RHH5298_R3664
1171.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.