HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:18.6 nTPM
HPA Brain:46.2 nTPM
GTEx:18.6 nTPM
FANTOM5:87.3 Scaled Tags Per Million
Pig:54.1 nTPM
Mouse:30.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029242
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 41.5
2621 Female, age 67, right hemisphere 48.1
1911 Female, age 85, right hemisphere 45.8
2529 Female, age 94, left hemisphere 43.5
2148 Female, age 91, left hemisphere 42.6
1898 Male, age 80, left hemisphere 35.5
1855 Male, age 76, left hemisphere 33.4
Dentate gyrus
nTPM: 37.1
2531 Female, age 67, both hemispheres 55.1
1927 Female, age 91, both hemispheres 41.5
2246 Female, age 85, both hemispheres 39.7
2528 Male, age 74, both hemispheres 31.4
2530 Female, age 94, left hemisphere 28.3
2010 Male, age 76, both hemispheres 26.9
Entorhinal gyrus
nTPM: 43.6
2613 Female, age 94, left hemisphere 55.1
1938 Female, age 85, left hemisphere 51.6
1787 Male, age 76, left hemisphere 44.0
2764 Male, age 80, right hemisphere 40.4
2686 Male, age 75, right hemisphere 38.9
2117 Female, age 91, right hemisphere 31.7
Hippocampus, CA1
nTPM: 41.2
2749 Male, age 80, left hemisphere 48.3
2045 Male, age 76, both hemispheres 46.9
1873 Female, age 85, both hemispheres 39.5
2527 Male, age 74, both hemispheres 38.7
2082 Female, age 91, right hemisphere 32.7
Hippocampus, CA2
nTPM: 32.6
1892 Male, age 76, both hemispheres 35.1
2113 Female, age 91, right hemisphere 34.5
2437 Female, age 94, left hemisphere 34.1
1963 Male, age 80, left hemisphere 31.8
1940 Female, age 85, left hemisphere 30.8
2249 Male, age 74, both hemispheres 29.3
Hippocampus, CA3
nTPM: 46.2
2620 Female, age 94, left hemisphere 58.4
2137 Male, age 80, left hemisphere 57.4
2861 Female, age 67, both hemispheres 52.5
1891 Female, age 85, both hemispheres 42.7
1867 Male, age 76, both hemispheres 36.9
2436 Male, age 74, both hemispheres 29.5
Parahippocampal cortex
nTPM: 40.2
2245 Female, age 91, both hemispheres 47.9
2250 Female, age 67, right hemisphere 45.9
2622 Female, age 67, right hemisphere 42.4
1933 Female, age 85, both hemispheres 41.5
1850 Male, age 80, both hemispheres 41.0
1990 Female, age 91, right hemisphere 40.0
2532 Female, age 72, left hemisphere 39.2
2692 Male, age 74, both hemispheres 37.0
2693 Female, age 94, both hemispheres 36.4
2018 Male, age 76, both hemispheres 30.8
Perirhinal gyrus
nTPM: 42.0
2521 Female, age 94, right hemisphere 44.7
1847 Female, age 91, left hemisphere 43.0
1841 Female, age 85, right hemisphere 41.3
2848 Male, age 76, right hemisphere 40.7
1794 Male, age 80, right hemisphere 40.2
Subiculum
nTPM: 37.9
1977 Female, age 85, both hemispheres 45.1
1901 Male, age 80, both hemispheres 41.3
2619 Male, age 74, both hemispheres 38.3
2438 Female, age 94, left hemisphere 37.2
2042 Male, age 76, both hemispheres 33.0
2729 Female, age 91, right hemisphere 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.6
Samples: 197

Max nTPM: 40.2
Min nTPM: 4.5
Std nTPM: 6.8
Median nTPM: 18.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 37.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 36.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 36.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 34.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 32.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 32.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 31.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 31.4
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 31.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.3
FF:10153-102I9 76 years, female 104.0
FF:10169-103B7 60 years, female 70.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.1
Pig sample Sample description nTPM
Subiculum
nTPM: 54.1
Samples: 4

Max nTPM: 79.7
Min nTPM: 39.0
Sample A Female 79.7
Sample B Female 49.8
Sample C Male 47.9
Sample D Male 39.0
Dorsal hippocampus
nTPM: 44.8
Samples: 4

Max nTPM: 49.8
Min nTPM: 36.9
Sample A Female 47.2
Sample B Female 49.8
Sample C Male 45.4
Sample D Male 36.9
Entorhinal cortex
nTPM: 52.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 44.8
Sample A Female 57.7
Sample B Female 44.8
Sample C Male 57.5
Sample D Male 51.1
Ventral hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 51.0
Min nTPM: 37.5
Sample A Female 37.5
Sample B Female 38.5
Sample C Male 47.2
Sample D Male 51.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 35.6
Min nTPM: 27.5
Sample A Male 27.5
Sample B Male 29.4
Sample C Female 27.8
Sample D Female 35.6
Hippocampal formation
nTPM: 23.9
Samples: 4

Max nTPM: 26.8
Min nTPM: 22.7
Sample A Male 23.3
Sample B Male 26.8
Sample C Female 22.8
Sample D Female 22.7

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