HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:26.4 nTPM
GTEx:10.1 nTPM
FANTOM5:51.6 Scaled Tags Per Million
Pig:26.6 nTPM
Mouse:15.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042313
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.2
1898 Male, age 80, left hemisphere 23.8
2621 Female, age 67, right hemisphere 23.3
1911 Female, age 85, right hemisphere 23.1
2529 Female, age 94, left hemisphere 23.0
1855 Male, age 76, left hemisphere 20.5
2148 Female, age 91, left hemisphere 19.4
Dentate gyrus
nTPM: 21.5
2010 Male, age 76, both hemispheres 28.9
1927 Female, age 91, both hemispheres 24.1
2530 Female, age 94, left hemisphere 22.8
2528 Male, age 74, both hemispheres 18.0
2531 Female, age 67, both hemispheres 17.8
2246 Female, age 85, both hemispheres 17.1
Entorhinal gyrus
nTPM: 22.2
2117 Female, age 91, right hemisphere 23.0
2764 Male, age 80, right hemisphere 22.9
2613 Female, age 94, left hemisphere 22.8
1938 Female, age 85, left hemisphere 21.9
2686 Male, age 75, right hemisphere 21.4
1787 Male, age 76, left hemisphere 21.3
Hippocampus, CA1
nTPM: 26.4
2749 Male, age 80, left hemisphere 44.0
2045 Male, age 76, both hemispheres 30.2
1873 Female, age 85, both hemispheres 21.0
2527 Male, age 74, both hemispheres 19.6
2082 Female, age 91, right hemisphere 17.0
Hippocampus, CA2
nTPM: 23.2
1892 Male, age 76, both hemispheres 34.4
1963 Male, age 80, left hemisphere 27.9
2437 Female, age 94, left hemisphere 20.9
1940 Female, age 85, left hemisphere 19.0
2113 Female, age 91, right hemisphere 18.5
2249 Male, age 74, both hemispheres 18.4
Hippocampus, CA3
nTPM: 26.2
1867 Male, age 76, both hemispheres 41.9
2137 Male, age 80, left hemisphere 40.4
1891 Female, age 85, both hemispheres 21.7
2861 Female, age 67, both hemispheres 21.0
2436 Male, age 74, both hemispheres 16.8
2620 Female, age 94, left hemisphere 15.6
Parahippocampal cortex
nTPM: 21.1
2245 Female, age 91, both hemispheres 23.6
1850 Male, age 80, both hemispheres 22.6
1990 Female, age 91, right hemisphere 22.5
2018 Male, age 76, both hemispheres 22.0
2532 Female, age 72, left hemisphere 22.0
1933 Female, age 85, both hemispheres 20.3
2250 Female, age 67, right hemisphere 20.2
2693 Female, age 94, both hemispheres 19.9
2622 Female, age 67, right hemisphere 19.1
2692 Male, age 74, both hemispheres 18.8
Perirhinal gyrus
nTPM: 21.2
2848 Male, age 76, right hemisphere 23.3
1847 Female, age 91, left hemisphere 22.4
1841 Female, age 85, right hemisphere 21.4
1794 Male, age 80, right hemisphere 19.6
2521 Female, age 94, right hemisphere 19.1
Subiculum
nTPM: 22.6
2042 Male, age 76, both hemispheres 28.8
1901 Male, age 80, both hemispheres 27.0
2438 Female, age 94, left hemisphere 20.9
1977 Female, age 85, both hemispheres 20.3
2619 Male, age 74, both hemispheres 19.2
2729 Female, age 91, right hemisphere 19.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 24.2
Min nTPM: 5.7
Std nTPM: 2.4
Median nTPM: 9.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 22.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 17.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 16.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 15.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 15.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 14.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 14.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 14.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 14.5
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 14.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.6
FF:10153-102I9 76 years, female 66.8
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.6
Pig sample Sample description nTPM
Subiculum
nTPM: 26.6
Samples: 4

Max nTPM: 31.3
Min nTPM: 23.7
Sample A Female 31.3
Sample B Female 25.6
Sample C Male 25.7
Sample D Male 23.7
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 32.3
Min nTPM: 20.4
Sample A Female 32.3
Sample B Female 25.2
Sample C Male 26.4
Sample D Male 20.4
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 24.4
Min nTPM: 20.0
Sample A Female 20.1
Sample B Female 22.1
Sample C Male 24.4
Sample D Male 20.0
Ventral hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 30.1
Min nTPM: 23.6
Sample A Female 23.6
Sample B Female 23.7
Sample C Male 25.2
Sample D Male 30.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 15.8
Min nTPM: 14.4
Sample A Male 15.8
Sample B Male 15.3
Sample C Female 14.4
Sample D Female 15.4
Hippocampal formation
nTPM: 15.1
Samples: 4

Max nTPM: 17.2
Min nTPM: 13.4
Sample A Male 14.3
Sample B Male 15.5
Sample C Female 17.2
Sample D Female 13.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74821831 Antisense, RP_060321_02_D11, Mouse strain C57BL/6J (56 days, male) 0.1

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