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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
270.5
nTPM
Monaco:
34.9
nTPM
Schmiedel:
31.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
270.5
HPA sample
nTPM
gdT-cell nTPM: 42.5
Samples: 6
Max nTPM: 61.6
Min nTPM: 29.8
P10809_1007
29.8
P10809_1022
43.1
P10809_1041
50.0
P10809_1060
39.2
P10809_1077
31.2
P10809_1098
61.6
MAIT T-cell nTPM: 78.6
Samples: 6
Max nTPM: 114.4
Min nTPM: 48.9
P10809_1006
48.9
P10809_1024
92.0
P10809_1043
96.9
P10809_1062
67.8
P10809_1083
51.8
P10809_1097
114.4
Memory CD4 T-cell nTPM: 139.3
Samples: 6
Max nTPM: 195.2
Min nTPM: 91.8
P10809_1014
121.0
P10809_1026
164.4
P10809_1045
127.4
P10809_1064
135.7
P10809_1086
91.8
P10809_1113
195.2
Memory CD8 T-cell nTPM: 74.6
Samples: 5
Max nTPM: 111.3
Min nTPM: 53.2
P10809_1012
80.2
P10809_1027
63.9
P10809_1046
64.2
P10809_1065
53.2
P10809_1111
111.3
Naive CD4 T-cell nTPM: 122.7
Samples: 6
Max nTPM: 154.5
Min nTPM: 88.2
P10809_1015
88.2
P10809_1030
134.8
P10809_1049
154.5
P10809_1068
109.5
P10809_1085
96.3
P10809_1112
152.7
Naive CD8 T-cell nTPM: 84.1
Samples: 6
Max nTPM: 104.6
Min nTPM: 41.4
P10809_1016
91.6
P10809_1031
85.4
P10809_1050
102.9
P10809_1069
78.7
P10809_1087
41.4
P10809_1110
104.6
T-reg nTPM: 270.5
Samples: 6
Max nTPM: 336.6
Min nTPM: 175.8
P10809_1018
175.8
P10809_1037
256.9
P10809_1056
336.6
P10809_1075
278.8
P10809_1094
259.7
P10809_1106
315.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 21.6
Samples: 4
Max nTPM: 28.3
Min nTPM: 17.9
RHH5202_R3573
18.0
RHH5230_R3602
17.9
RHH5259_R3631
22.1
RHH5288_R3660
28.3
Effector memory CD8 T-cell nTPM: 8.3
Samples: 4
Max nTPM: 11.6
Min nTPM: 4.3
RHH5203_R3574
11.6
RHH5231_R3603
8.2
RHH5260_R3632
8.9
RHH5289_R3661
4.3
MAIT T-cell nTPM: 8.5
Samples: 4
Max nTPM: 10.8
Min nTPM: 5.6
RHH5233_R3605
7.8
RHH5205_R3576
9.6
RHH5262_R3634
5.6
RHH5297_R3663
10.8
Memory CD4 T-cell TFH nTPM: 26.4
Samples: 4
Max nTPM: 47.9
Min nTPM: 17.8
RHH5300_R3666
21.1
RHH5236_R3608
47.9
RHH5265_R3637
17.8
RHH5208_R3579
18.7
Memory CD4 T-cell Th1 nTPM: 27.4
Samples: 4
Max nTPM: 44.6
Min nTPM: 8.0
RHH5210_R3581
8.0
RHH5302_R3668
44.6
RHH5238_R3610
32.0
RHH5267_R3639
24.8
Memory CD4 T-cell Th1/Th17 nTPM: 16.9
Samples: 4
Max nTPM: 20.3
Min nTPM: 12.9
RHH5303_R3669
19.4
RHH5211_R3582
12.9
RHH5239_R3611
15.0
RHH5268_R3640
20.3
Memory CD4 T-cell Th17 nTPM: 21.6
Samples: 4
Max nTPM: 26.2
Min nTPM: 16.9
RHH5304_R3670
24.0
RHH5212_R3583
26.2
RHH5240_R3612
16.9
RHH5269_R3641
19.1
Memory CD4 T-cell Th2 nTPM: 22.0
Samples: 4
Max nTPM: 27.9
Min nTPM: 14.8
RHH5305_R3671
27.9
RHH5213_R3584
26.7
RHH5241_R3613
14.8
RHH5270_R3642
18.6
Naive CD4 T-cell nTPM: 25.3
Samples: 4
Max nTPM: 37.2
Min nTPM: 19.0
RHH5306_R3672
19.4
RHH5214_R3585
37.2
RHH5242_R3614
19.0
RHH5271_R3643
25.5
Naive CD8 T-cell nTPM: 18.5
Samples: 4
Max nTPM: 30.7
Min nTPM: 7.0
RHH5201_R3572
7.0
RHH5229_R3601
30.7
RHH5258_R3630
12.0
RHH5287_R3659
24.1
Non-Vd2 gdTCR nTPM: 5.4
Samples: 4
Max nTPM: 8.8
Min nTPM: 3.7
RHH5235_R3607
4.6
RHH5264_R3636
4.3
RHH5207_R3578
3.7
RHH5299_R3665
8.8
T-reg nTPM: 34.9
Samples: 4
Max nTPM: 41.1
Min nTPM: 30.4
RHH5301_R3667
41.1
RHH5237_R3609
30.4
RHH5266_R3638
31.4
RHH5209_R3580
36.8
Terminal effector memory CD4 T-cell nTPM: 3.2
Samples: 2
Max nTPM: 3.6
Min nTPM: 2.7
RHH5243_R3615
2.7
RHH5272_R3644
3.6
Terminal effector memory CD8 T-cell nTPM: 8.6
Samples: 4
Max nTPM: 14.4
Min nTPM: 4.7
RHH5232_R3604
4.7
RHH5204_R3575
14.4
RHH5261_R3633
6.9
RHH5296_R3662
8.3
Vd2 gdTCR nTPM: 11.6
Samples: 4
Max nTPM: 15.3
Min nTPM: 9.0
RHH5234_R3606
9.5
RHH5206_R3577
9.0
RHH5263_R3635
12.5
RHH5298_R3664
15.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
