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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.2
nTPM
Monaco:
83.6
nTPM
Schmiedel:
100.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.2
HPA sample
nTPM
gdT-cell nTPM: 17.1
Samples: 6
Max nTPM: 20.9
Min nTPM: 13.6
P10809_1007
13.6
P10809_1022
20.9
P10809_1041
15.5
P10809_1060
20.4
P10809_1077
16.4
P10809_1098
15.8
MAIT T-cell nTPM: 20.9
Samples: 6
Max nTPM: 29.4
Min nTPM: 14.3
P10809_1006
21.6
P10809_1024
21.6
P10809_1043
18.5
P10809_1062
20.2
P10809_1083
14.3
P10809_1097
29.4
Memory CD4 T-cell nTPM: 17.2
Samples: 6
Max nTPM: 21.8
Min nTPM: 11.8
P10809_1014
15.1
P10809_1026
11.8
P10809_1045
19.9
P10809_1064
18.1
P10809_1086
16.7
P10809_1113
21.8
Memory CD8 T-cell nTPM: 18.3
Samples: 5
Max nTPM: 21.7
Min nTPM: 13.6
P10809_1012
21.7
P10809_1027
13.6
P10809_1046
19.2
P10809_1065
20.0
P10809_1111
17.0
Naive CD4 T-cell nTPM: 16.2
Samples: 6
Max nTPM: 21.1
Min nTPM: 13.2
P10809_1015
16.1
P10809_1030
13.2
P10809_1049
16.6
P10809_1068
21.1
P10809_1085
15.0
P10809_1112
15.3
Naive CD8 T-cell nTPM: 15.7
Samples: 6
Max nTPM: 19.4
Min nTPM: 9.1
P10809_1016
13.4
P10809_1031
9.1
P10809_1050
19.4
P10809_1069
17.9
P10809_1087
18.1
P10809_1110
16.4
T-reg nTPM: 21.2
Samples: 6
Max nTPM: 33.8
Min nTPM: 12.1
P10809_1018
19.9
P10809_1037
12.1
P10809_1056
23.7
P10809_1075
19.2
P10809_1094
33.8
P10809_1106
18.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.4
Samples: 4
Max nTPM: 80.7
Min nTPM: 63.5
RHH5202_R3573
63.5
RHH5230_R3602
76.9
RHH5259_R3631
80.7
RHH5288_R3660
64.3
Effector memory CD8 T-cell nTPM: 74.4
Samples: 4
Max nTPM: 76.9
Min nTPM: 68.3
RHH5203_R3574
68.3
RHH5231_R3603
76.3
RHH5260_R3632
76.9
RHH5289_R3661
76.0
MAIT T-cell nTPM: 81.5
Samples: 4
Max nTPM: 92.8
Min nTPM: 75.5
RHH5233_R3605
77.1
RHH5205_R3576
92.8
RHH5262_R3634
75.5
RHH5297_R3663
80.4
Memory CD4 T-cell TFH nTPM: 74.5
Samples: 4
Max nTPM: 92.9
Min nTPM: 59.1
RHH5300_R3666
59.1
RHH5236_R3608
66.9
RHH5265_R3637
78.9
RHH5208_R3579
92.9
Memory CD4 T-cell Th1 nTPM: 71.5
Samples: 4
Max nTPM: 99.8
Min nTPM: 53.7
RHH5210_R3581
99.8
RHH5302_R3668
57.7
RHH5238_R3610
74.6
RHH5267_R3639
53.7
Memory CD4 T-cell Th1/Th17 nTPM: 83.6
Samples: 4
Max nTPM: 101.2
Min nTPM: 74.7
RHH5303_R3669
75.4
RHH5211_R3582
83.0
RHH5239_R3611
101.2
RHH5268_R3640
74.7
Memory CD4 T-cell Th17 nTPM: 81.4
Samples: 4
Max nTPM: 90.9
Min nTPM: 76.3
RHH5304_R3670
76.3
RHH5212_R3583
79.6
RHH5240_R3612
90.9
RHH5269_R3641
78.9
Memory CD4 T-cell Th2 nTPM: 73.9
Samples: 4
Max nTPM: 79.1
Min nTPM: 64.7
RHH5305_R3671
64.7
RHH5213_R3584
78.8
RHH5241_R3613
79.1
RHH5270_R3642
73.1
Naive CD4 T-cell nTPM: 62.5
Samples: 4
Max nTPM: 79.4
Min nTPM: 48.9
RHH5306_R3672
63.4
RHH5214_R3585
58.3
RHH5242_R3614
79.4
RHH5271_R3643
48.9
Naive CD8 T-cell nTPM: 65.9
Samples: 4
Max nTPM: 77.7
Min nTPM: 52.9
RHH5201_R3572
64.3
RHH5229_R3601
77.7
RHH5258_R3630
68.8
RHH5287_R3659
52.9
Non-Vd2 gdTCR nTPM: 78.0
Samples: 4
Max nTPM: 85.3
Min nTPM: 63.7
RHH5235_R3607
85.3
RHH5264_R3636
84.0
RHH5207_R3578
79.0
RHH5299_R3665
63.7
T-reg nTPM: 75.2
Samples: 4
Max nTPM: 96.1
Min nTPM: 58.3
RHH5301_R3667
60.5
RHH5237_R3609
85.7
RHH5266_R3638
58.3
RHH5209_R3580
96.1
Terminal effector memory CD4 T-cell nTPM: 74.9
Samples: 2
Max nTPM: 81.8
Min nTPM: 68.0
RHH5243_R3615
81.8
RHH5272_R3644
68.0
Terminal effector memory CD8 T-cell nTPM: 76.0
Samples: 4
Max nTPM: 83.0
Min nTPM: 69.8
RHH5232_R3604
78.4
RHH5204_R3575
72.8
RHH5261_R3633
83.0
RHH5296_R3662
69.8
Vd2 gdTCR nTPM: 63.7
Samples: 4
Max nTPM: 70.7
Min nTPM: 57.7
RHH5234_R3606
61.0
RHH5206_R3577
57.7
RHH5263_R3635
70.7
RHH5298_R3664
65.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
