HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:61.2 nTPM
HPA Brain:122.6 nTPM
GTEx:61.2 nTPM
FANTOM5:296.6 Scaled Tags Per Million
Pig:107.9 nTPM
Mouse:297.7 nTPM
Allen mouse:20.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014561
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.6
Sample id Sample description nTPM
Hippocampus
nTPM: 104.8
1898 Male, age 80, left hemisphere 145.8
1855 Male, age 76, left hemisphere 104.8
1911 Female, age 85, right hemisphere 101.7
2621 Female, age 67, right hemisphere 95.0
2529 Female, age 94, left hemisphere 93.8
2148 Female, age 91, left hemisphere 88.0
Dentate gyrus
nTPM: 105.7
1927 Female, age 91, both hemispheres 130.1
2010 Male, age 76, both hemispheres 127.9
2528 Male, age 74, both hemispheres 104.5
2530 Female, age 94, left hemisphere 101.9
2246 Female, age 85, both hemispheres 93.4
2531 Female, age 67, both hemispheres 76.5
Entorhinal gyrus
nTPM: 94.9
1938 Female, age 85, left hemisphere 114.4
2764 Male, age 80, right hemisphere 103.5
2117 Female, age 91, right hemisphere 99.9
1787 Male, age 76, left hemisphere 95.4
2613 Female, age 94, left hemisphere 88.7
2686 Male, age 75, right hemisphere 67.8
Hippocampus, CA1
nTPM: 122.6
2749 Male, age 80, left hemisphere 170.7
1873 Female, age 85, both hemispheres 122.3
2045 Male, age 76, both hemispheres 112.3
2527 Male, age 74, both hemispheres 106.6
2082 Female, age 91, right hemisphere 101.1
Hippocampus, CA2
nTPM: 116.4
1892 Male, age 76, both hemispheres 159.0
1963 Male, age 80, left hemisphere 131.8
2249 Male, age 74, both hemispheres 124.6
1940 Female, age 85, left hemisphere 102.9
2113 Female, age 91, right hemisphere 94.8
2437 Female, age 94, left hemisphere 85.5
Hippocampus, CA3
nTPM: 110.2
2137 Male, age 80, left hemisphere 141.2
1867 Male, age 76, both hemispheres 139.6
2436 Male, age 74, both hemispheres 115.6
1891 Female, age 85, both hemispheres 104.2
2620 Female, age 94, left hemisphere 87.5
2861 Female, age 67, both hemispheres 73.0
Parahippocampal cortex
nTPM: 96.5
1850 Male, age 80, both hemispheres 127.0
1990 Female, age 91, right hemisphere 112.5
1933 Female, age 85, both hemispheres 112.2
2018 Male, age 76, both hemispheres 106.6
2250 Female, age 67, right hemisphere 103.8
2245 Female, age 91, both hemispheres 93.6
2693 Female, age 94, both hemispheres 90.4
2532 Female, age 72, left hemisphere 85.2
2692 Male, age 74, both hemispheres 76.4
2622 Female, age 67, right hemisphere 57.0
Perirhinal gyrus
nTPM: 118.2
1847 Female, age 91, left hemisphere 146.4
1841 Female, age 85, right hemisphere 125.6
1794 Male, age 80, right hemisphere 112.5
2521 Female, age 94, right hemisphere 108.8
2848 Male, age 76, right hemisphere 98.0
Subiculum
nTPM: 99.4
1901 Male, age 80, both hemispheres 122.8
1977 Female, age 85, both hemispheres 111.8
2042 Male, age 76, both hemispheres 101.4
2729 Female, age 91, right hemisphere 97.9
2438 Female, age 94, left hemisphere 87.4
2619 Male, age 74, both hemispheres 75.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.2
Samples: 197

Max nTPM: 109.9
Min nTPM: 29.2
Std nTPM: 12.9
Median nTPM: 59.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 109.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 108.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 107.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 97.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 90.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 87.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 85.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 85.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 84.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 84.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 84.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 296.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 296.6
FF:10169-103B7 60 years, female 322.9
FF:10153-102I9 76 years, female 270.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.9
Pig sample Sample description nTPM
Subiculum
nTPM: 92.0
Samples: 4

Max nTPM: 100.9
Min nTPM: 82.8
Sample A Female 100.9
Sample B Female 82.8
Sample C Male 89.6
Sample D Male 94.8
Dorsal hippocampus
nTPM: 108.0
Samples: 4

Max nTPM: 123.6
Min nTPM: 92.4
Sample A Female 123.6
Sample B Female 114.6
Sample C Male 101.2
Sample D Male 92.4
Entorhinal cortex
nTPM: 100.7
Samples: 4

Max nTPM: 114.1
Min nTPM: 91.6
Sample A Female 93.6
Sample B Female 114.1
Sample C Male 103.3
Sample D Male 91.6
Ventral hippocampus
nTPM: 99.0
Samples: 4

Max nTPM: 110.9
Min nTPM: 80.7
Sample A Female 110.9
Sample B Female 80.7
Sample C Male 100.0
Sample D Male 104.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 297.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 291.1
Samples: 4

Max nTPM: 312.0
Min nTPM: 274.6
Sample A Male 274.6
Sample B Male 312.0
Sample C Female 280.9
Sample D Female 296.9
Hippocampal formation
nTPM: 297.7
Samples: 4

Max nTPM: 335.1
Min nTPM: 269.4
Sample A Male 335.1
Sample B Male 289.8
Sample C Female 296.5
Sample D Female 269.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.2
70429214 Antisense, RP_050614_01_C04, Mouse strain C57BL/6J (56 days, male) 20.9
81600550 Antisense, RP_080402_04_A11, Mouse strain C57BL/6J (56 days, male) 19.5

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