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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.2
nTPM
Monaco:
219.3
nTPM
Schmiedel:
143.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.2
HPA sample
nTPM
gdT-cell nTPM: 37.2
Samples: 6
Max nTPM: 49.8
Min nTPM: 24.8
P10809_1007
24.8
P10809_1022
49.8
P10809_1041
37.9
P10809_1060
38.4
P10809_1077
42.4
P10809_1098
30.1
MAIT T-cell nTPM: 44.9
Samples: 6
Max nTPM: 65.9
Min nTPM: 35.9
P10809_1006
39.8
P10809_1024
65.9
P10809_1043
35.9
P10809_1062
47.0
P10809_1083
36.4
P10809_1097
44.3
Memory CD4 T-cell nTPM: 37.4
Samples: 6
Max nTPM: 52.2
Min nTPM: 26.3
P10809_1014
27.6
P10809_1026
26.3
P10809_1045
38.7
P10809_1064
40.6
P10809_1086
52.2
P10809_1113
39.2
Memory CD8 T-cell nTPM: 36.7
Samples: 5
Max nTPM: 46.6
Min nTPM: 31.8
P10809_1012
31.8
P10809_1027
35.8
P10809_1046
35.7
P10809_1065
46.6
P10809_1111
33.4
Naive CD4 T-cell nTPM: 34.9
Samples: 6
Max nTPM: 48.6
Min nTPM: 27.0
P10809_1015
27.5
P10809_1030
30.8
P10809_1049
27.0
P10809_1068
48.6
P10809_1085
43.2
P10809_1112
32.5
Naive CD8 T-cell nTPM: 34.6
Samples: 6
Max nTPM: 50.8
Min nTPM: 18.1
P10809_1016
18.1
P10809_1031
26.6
P10809_1050
29.0
P10809_1069
49.1
P10809_1087
50.8
P10809_1110
34.1
T-reg nTPM: 53.3
Samples: 6
Max nTPM: 68.4
Min nTPM: 25.7
P10809_1018
42.1
P10809_1037
59.9
P10809_1056
25.7
P10809_1075
67.7
P10809_1094
68.4
P10809_1106
55.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
219.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 158.2
Samples: 4
Max nTPM: 182.3
Min nTPM: 141.1
RHH5202_R3573
161.6
RHH5230_R3602
141.1
RHH5259_R3631
182.3
RHH5288_R3660
147.7
Effector memory CD8 T-cell nTPM: 170.6
Samples: 4
Max nTPM: 193.3
Min nTPM: 145.6
RHH5203_R3574
145.6
RHH5231_R3603
187.7
RHH5260_R3632
155.7
RHH5289_R3661
193.3
MAIT T-cell nTPM: 150.2
Samples: 4
Max nTPM: 184.8
Min nTPM: 116.7
RHH5233_R3605
181.5
RHH5205_R3576
184.8
RHH5262_R3634
117.7
RHH5297_R3663
116.7
Memory CD4 T-cell TFH nTPM: 156.7
Samples: 4
Max nTPM: 181.1
Min nTPM: 131.6
RHH5300_R3666
133.8
RHH5236_R3608
181.1
RHH5265_R3637
131.6
RHH5208_R3579
180.4
Memory CD4 T-cell Th1 nTPM: 158.3
Samples: 4
Max nTPM: 214.9
Min nTPM: 118.9
RHH5210_R3581
147.3
RHH5302_R3668
152.0
RHH5238_R3610
214.9
RHH5267_R3639
118.9
Memory CD4 T-cell Th1/Th17 nTPM: 177.9
Samples: 4
Max nTPM: 253.2
Min nTPM: 130.7
RHH5303_R3669
166.2
RHH5211_R3582
130.7
RHH5239_R3611
253.2
RHH5268_R3640
161.3
Memory CD4 T-cell Th17 nTPM: 178.1
Samples: 4
Max nTPM: 252.2
Min nTPM: 126.3
RHH5304_R3670
126.3
RHH5212_R3583
166.0
RHH5240_R3612
252.2
RHH5269_R3641
167.7
Memory CD4 T-cell Th2 nTPM: 142.5
Samples: 4
Max nTPM: 154.6
Min nTPM: 135.6
RHH5305_R3671
140.6
RHH5213_R3584
135.6
RHH5241_R3613
154.6
RHH5270_R3642
139.2
Naive CD4 T-cell nTPM: 129.7
Samples: 4
Max nTPM: 167.0
Min nTPM: 110.3
RHH5306_R3672
110.3
RHH5214_R3585
130.4
RHH5242_R3614
167.0
RHH5271_R3643
110.9
Naive CD8 T-cell nTPM: 129.7
Samples: 4
Max nTPM: 142.7
Min nTPM: 115.9
RHH5201_R3572
133.1
RHH5229_R3601
126.9
RHH5258_R3630
115.9
RHH5287_R3659
142.7
Non-Vd2 gdTCR nTPM: 186.3
Samples: 4
Max nTPM: 255.1
Min nTPM: 132.4
RHH5235_R3607
194.4
RHH5264_R3636
132.4
RHH5207_R3578
255.1
RHH5299_R3665
163.2
T-reg nTPM: 136.8
Samples: 4
Max nTPM: 178.6
Min nTPM: 101.2
RHH5301_R3667
101.2
RHH5237_R3609
178.6
RHH5266_R3638
133.8
RHH5209_R3580
133.4
Terminal effector memory CD4 T-cell nTPM: 219.3
Samples: 2
Max nTPM: 229.8
Min nTPM: 208.7
RHH5243_R3615
229.8
RHH5272_R3644
208.7
Terminal effector memory CD8 T-cell nTPM: 200.0
Samples: 4
Max nTPM: 240.9
Min nTPM: 162.6
RHH5232_R3604
240.9
RHH5204_R3575
162.6
RHH5261_R3633
171.0
RHH5296_R3662
225.4
Vd2 gdTCR nTPM: 146.5
Samples: 4
Max nTPM: 191.0
Min nTPM: 107.6
RHH5234_R3606
172.5
RHH5206_R3577
107.6
RHH5263_R3635
191.0
RHH5298_R3664
115.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
