HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:35.6 nTPM
HPA Brain:75.7 nTPM
GTEx:35.6 nTPM
FANTOM5:70.1 Scaled Tags Per Million
Pig:184.5 nTPM
Mouse:253.5 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036913Antibody HPA036914Antibody CAB032907
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumLowLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.7
Sample id Sample description nTPM
Hippocampus
nTPM: 49.3
1898 Male, age 80, left hemisphere 88.3
1855 Male, age 76, left hemisphere 50.8
2621 Female, age 67, right hemisphere 47.9
1911 Female, age 85, right hemisphere 38.2
2148 Female, age 91, left hemisphere 37.8
2529 Female, age 94, left hemisphere 32.4
Dentate gyrus
nTPM: 57.5
2010 Male, age 76, both hemispheres 89.2
2530 Female, age 94, left hemisphere 69.1
1927 Female, age 91, both hemispheres 63.4
2246 Female, age 85, both hemispheres 50.4
2528 Male, age 74, both hemispheres 43.5
2531 Female, age 67, both hemispheres 29.2
Entorhinal gyrus
nTPM: 42.1
1938 Female, age 85, left hemisphere 52.5
2764 Male, age 80, right hemisphere 48.1
2686 Male, age 75, right hemisphere 42.0
1787 Male, age 76, left hemisphere 40.7
2613 Female, age 94, left hemisphere 36.6
2117 Female, age 91, right hemisphere 32.8
Hippocampus, CA1
nTPM: 75.7
2749 Male, age 80, left hemisphere 150.4
1873 Female, age 85, both hemispheres 90.4
2045 Male, age 76, both hemispheres 69.9
2527 Male, age 74, both hemispheres 39.0
2082 Female, age 91, right hemisphere 29.0
Hippocampus, CA2
nTPM: 56.8
1963 Male, age 80, left hemisphere 102.1
1892 Male, age 76, both hemispheres 81.4
2249 Male, age 74, both hemispheres 49.1
2437 Female, age 94, left hemisphere 40.9
1940 Female, age 85, left hemisphere 36.9
2113 Female, age 91, right hemisphere 30.5
Hippocampus, CA3
nTPM: 43.7
2137 Male, age 80, left hemisphere 57.6
1867 Male, age 76, both hemispheres 57.2
1891 Female, age 85, both hemispheres 44.1
2436 Male, age 74, both hemispheres 40.6
2620 Female, age 94, left hemisphere 31.5
2861 Female, age 67, both hemispheres 31.3
Parahippocampal cortex
nTPM: 45.9
1933 Female, age 85, both hemispheres 67.0
1850 Male, age 80, both hemispheres 62.5
2693 Female, age 94, both hemispheres 51.1
2250 Female, age 67, right hemisphere 48.4
2532 Female, age 72, left hemisphere 46.2
2622 Female, age 67, right hemisphere 42.2
1990 Female, age 91, right hemisphere 41.8
2245 Female, age 91, both hemispheres 39.3
2692 Male, age 74, both hemispheres 32.3
2018 Male, age 76, both hemispheres 28.5
Perirhinal gyrus
nTPM: 56.0
1841 Female, age 85, right hemisphere 63.3
1847 Female, age 91, left hemisphere 62.2
2521 Female, age 94, right hemisphere 57.1
1794 Male, age 80, right hemisphere 50.7
2848 Male, age 76, right hemisphere 46.8
Subiculum
nTPM: 36.7
1977 Female, age 85, both hemispheres 50.3
2042 Male, age 76, both hemispheres 40.2
1901 Male, age 80, both hemispheres 38.7
2729 Female, age 91, right hemisphere 33.5
2438 Female, age 94, left hemisphere 29.3
2619 Male, age 74, both hemispheres 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.6
Samples: 197

Max nTPM: 114.2
Min nTPM: 8.4
Std nTPM: 18.3
Median nTPM: 31.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 114.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 104.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 89.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 86.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 83.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 82.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 81.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 77.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 76.4
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 76.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.1
FF:10169-103B7 60 years, female 112.1
FF:10153-102I9 76 years, female 28.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 184.5
Pig sample Sample description nTPM
Subiculum
nTPM: 184.5
Samples: 4

Max nTPM: 189.5
Min nTPM: 177.9
Sample A Female 189.5
Sample B Female 177.9
Sample C Male 181.9
Sample D Male 188.6
Dorsal hippocampus
nTPM: 157.2
Samples: 4

Max nTPM: 178.2
Min nTPM: 143.2
Sample A Female 178.2
Sample B Female 161.1
Sample C Male 143.2
Sample D Male 146.4
Entorhinal cortex
nTPM: 163.4
Samples: 4

Max nTPM: 182.2
Min nTPM: 136.3
Sample A Female 154.3
Sample B Female 182.2
Sample C Male 180.7
Sample D Male 136.3
Ventral hippocampus
nTPM: 172.9
Samples: 4

Max nTPM: 193.4
Min nTPM: 153.0
Sample A Female 193.4
Sample B Female 165.0
Sample C Male 180.0
Sample D Male 153.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 253.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 253.6
Samples: 4

Max nTPM: 276.6
Min nTPM: 227.8
Sample A Male 252.9
Sample B Male 256.9
Sample C Female 227.8
Sample D Female 276.6
Hippocampal formation
nTPM: 225.1
Samples: 4

Max nTPM: 242.4
Min nTPM: 208.7
Sample A Male 242.4
Sample B Male 208.7
Sample C Female 229.4
Sample D Female 219.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
80517057 Antisense, RP_071128_03_B12, Mouse strain C57BL/6J (56 days, male) 9.7
1745 Antisense, RP_040526_02_D06, Mouse strain C57BL/6J (56 days, male) 9.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org