HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:16.2 nTPM
HPA Brain:10.1 nTPM
GTEx:16.2 nTPM
FANTOM5:22.1 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:14.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044555Antibody HPA058103
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.1
Sample id Sample description nTPM
Hippocampus
nTPM: 7.7
1898 Male, age 80, left hemisphere 10.8
1855 Male, age 76, left hemisphere 8.1
2148 Female, age 91, left hemisphere 7.7
1911 Female, age 85, right hemisphere 7.5
2621 Female, age 67, right hemisphere 7.1
2529 Female, age 94, left hemisphere 5.3
Dentate gyrus
nTPM: 9.4
1927 Female, age 91, both hemispheres 13.7
2528 Male, age 74, both hemispheres 9.9
2246 Female, age 85, both hemispheres 9.4
2010 Male, age 76, both hemispheres 8.6
2531 Female, age 67, both hemispheres 8.4
2530 Female, age 94, left hemisphere 6.2
Entorhinal gyrus
nTPM: 6.2
1938 Female, age 85, left hemisphere 9.3
1787 Male, age 76, left hemisphere 6.7
2764 Male, age 80, right hemisphere 6.4
2613 Female, age 94, left hemisphere 5.7
2117 Female, age 91, right hemisphere 4.6
2686 Male, age 75, right hemisphere 4.5
Hippocampus, CA1
nTPM: 10.0
2749 Male, age 80, left hemisphere 13.5
1873 Female, age 85, both hemispheres 11.3
2082 Female, age 91, right hemisphere 10.1
2045 Male, age 76, both hemispheres 9.2
2527 Male, age 74, both hemispheres 6.0
Hippocampus, CA2
nTPM: 9.8
2249 Male, age 74, both hemispheres 15.0
1892 Male, age 76, both hemispheres 10.8
1940 Female, age 85, left hemisphere 9.7
1963 Male, age 80, left hemisphere 8.6
2113 Female, age 91, right hemisphere 8.0
2437 Female, age 94, left hemisphere 6.9
Hippocampus, CA3
nTPM: 9.0
2436 Male, age 74, both hemispheres 15.9
1867 Male, age 76, both hemispheres 10.2
2137 Male, age 80, left hemisphere 9.2
2620 Female, age 94, left hemisphere 7.3
1891 Female, age 85, both hemispheres 6.8
2861 Female, age 67, both hemispheres 4.7
Parahippocampal cortex
nTPM: 8.2
1850 Male, age 80, both hemispheres 13.0
2693 Female, age 94, both hemispheres 9.8
1933 Female, age 85, both hemispheres 9.6
2250 Female, age 67, right hemisphere 9.0
1990 Female, age 91, right hemisphere 8.4
2245 Female, age 91, both hemispheres 8.1
2018 Male, age 76, both hemispheres 6.6
2692 Male, age 74, both hemispheres 6.3
2532 Female, age 72, left hemisphere 5.7
2622 Female, age 67, right hemisphere 5.6
Perirhinal gyrus
nTPM: 10.1
1847 Female, age 91, left hemisphere 13.8
1841 Female, age 85, right hemisphere 11.4
1794 Male, age 80, right hemisphere 9.5
2848 Male, age 76, right hemisphere 8.2
2521 Female, age 94, right hemisphere 7.8
Subiculum
nTPM: 7.6
1901 Male, age 80, both hemispheres 9.2
2438 Female, age 94, left hemisphere 8.9
2729 Female, age 91, right hemisphere 7.7
1977 Female, age 85, both hemispheres 7.2
2042 Male, age 76, both hemispheres 6.8
2619 Male, age 74, both hemispheres 5.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.2
Samples: 197

Max nTPM: 50.8
Min nTPM: 1.0
Std nTPM: 7.6
Median nTPM: 16.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 50.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 41.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 38.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 31.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 30.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.4
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 29.2
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 29.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 28.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.1
FF:10169-103B7 60 years, female 27.0
FF:10153-102I9 76 years, female 17.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Subiculum
nTPM: 22.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 12.3
Sample A Female 12.3
Sample B Female 24.9
Sample C Male 23.9
Sample D Male 27.7
Dorsal hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 27.8
Min nTPM: 15.3
Sample A Female 15.3
Sample B Female 22.7
Sample C Male 21.0
Sample D Male 27.8
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 31.2
Min nTPM: 23.5
Sample A Female 23.5
Sample B Female 24.4
Sample C Male 23.7
Sample D Male 31.2
Ventral hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 28.0
Min nTPM: 17.3
Sample A Female 22.3
Sample B Female 28.0
Sample C Male 17.3
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 13.4
Min nTPM: 8.5
Sample A Male 8.5
Sample B Male 13.4
Sample C Female 9.9
Sample D Female 11.6
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 17.7
Min nTPM: 10.9
Sample A Male 15.3
Sample B Male 10.9
Sample C Female 12.2
Sample D Female 17.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
75850264 Antisense, RP_060601_02_F09, Mouse strain C57BL/6J (56 days, male) 0.6

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