HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:7.1 nTPM
HPA Brain:36.9 nTPM
GTEx:7.1 nTPM
FANTOM5:72.1 Scaled Tags Per Million
Pig:13.8 nTPM
Mouse:10.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018686Antibody HPA021149
Glial cells Not detectedLow
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.2
1898 Male, age 80, left hemisphere 33.2
2621 Female, age 67, right hemisphere 29.3
2529 Female, age 94, left hemisphere 29.2
1911 Female, age 85, right hemisphere 28.4
2148 Female, age 91, left hemisphere 26.0
1855 Male, age 76, left hemisphere 22.9
Dentate gyrus
nTPM: 28.7
1927 Female, age 91, both hemispheres 30.4
2246 Female, age 85, both hemispheres 30.1
2531 Female, age 67, both hemispheres 29.8
2530 Female, age 94, left hemisphere 27.6
2528 Male, age 74, both hemispheres 27.4
2010 Male, age 76, both hemispheres 27.2
Entorhinal gyrus
nTPM: 31.8
2764 Male, age 80, right hemisphere 37.0
1938 Female, age 85, left hemisphere 34.2
1787 Male, age 76, left hemisphere 31.9
2117 Female, age 91, right hemisphere 30.9
2613 Female, age 94, left hemisphere 29.9
2686 Male, age 75, right hemisphere 27.0
Hippocampus, CA1
nTPM: 31.7
2749 Male, age 80, left hemisphere 43.7
2527 Male, age 74, both hemispheres 29.5
1873 Female, age 85, both hemispheres 29.4
2082 Female, age 91, right hemisphere 28.6
2045 Male, age 76, both hemispheres 27.4
Hippocampus, CA2
nTPM: 30.0
1892 Male, age 76, both hemispheres 35.4
2249 Male, age 74, both hemispheres 32.2
1940 Female, age 85, left hemisphere 32.1
2437 Female, age 94, left hemisphere 27.2
1963 Male, age 80, left hemisphere 26.7
2113 Female, age 91, right hemisphere 26.2
Hippocampus, CA3
nTPM: 31.5
2137 Male, age 80, left hemisphere 40.3
2620 Female, age 94, left hemisphere 34.2
1867 Male, age 76, both hemispheres 32.4
1891 Female, age 85, both hemispheres 29.1
2436 Male, age 74, both hemispheres 28.1
2861 Female, age 67, both hemispheres 24.7
Parahippocampal cortex
nTPM: 31.0
1850 Male, age 80, both hemispheres 37.0
1990 Female, age 91, right hemisphere 34.4
2245 Female, age 91, both hemispheres 33.8
1933 Female, age 85, both hemispheres 32.8
2532 Female, age 72, left hemisphere 32.6
2250 Female, age 67, right hemisphere 32.1
2693 Female, age 94, both hemispheres 31.2
2018 Male, age 76, both hemispheres 28.3
2622 Female, age 67, right hemisphere 25.1
2692 Male, age 74, both hemispheres 22.4
Perirhinal gyrus
nTPM: 36.9
1794 Male, age 80, right hemisphere 40.0
1847 Female, age 91, left hemisphere 39.3
1841 Female, age 85, right hemisphere 38.5
2848 Male, age 76, right hemisphere 33.8
2521 Female, age 94, right hemisphere 33.0
Subiculum
nTPM: 30.7
1901 Male, age 80, both hemispheres 36.7
1977 Female, age 85, both hemispheres 36.3
2438 Female, age 94, left hemisphere 33.9
2042 Male, age 76, both hemispheres 26.7
2619 Male, age 74, both hemispheres 26.2
2729 Female, age 91, right hemisphere 24.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.1
Samples: 197

Max nTPM: 19.1
Min nTPM: 3.3
Std nTPM: 2.1
Median nTPM: 6.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 19.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 13.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 13.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 12.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 11.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 11.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 11.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 11.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 11.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 11.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 11.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.1
FF:10153-102I9 76 years, female 74.7
FF:10169-103B7 60 years, female 69.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.8
Pig sample Sample description nTPM
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 17.0
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 13.6
Sample C Male 17.0
Sample D Male 14.0
Dorsal hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 15.9
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 12.0
Sample C Male 15.9
Sample D Male 13.7
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 16.8
Min nTPM: 12.5
Sample A Female 13.0
Sample B Female 12.5
Sample C Male 12.9
Sample D Male 16.8
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 16.9
Min nTPM: 10.4
Sample A Female 11.7
Sample B Female 16.9
Sample C Male 10.4
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.5
Sample A Male 9.5
Sample B Male 10.8
Sample C Female 10.6
Sample D Female 10.5
Hippocampal formation
nTPM: 10.5
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.8
Sample A Male 11.9
Sample B Male 10.3
Sample C Female 9.8
Sample D Female 10.0

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