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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
129.6
nTPM
Monaco:
116.1
nTPM
Schmiedel:
64.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.6
HPA sample
nTPM
gdT-cell nTPM: 86.4
Samples: 6
Max nTPM: 116.0
Min nTPM: 69.4
P10809_1007
69.4
P10809_1022
116.0
P10809_1041
91.4
P10809_1060
81.1
P10809_1077
77.8
P10809_1098
82.5
MAIT T-cell nTPM: 92.0
Samples: 6
Max nTPM: 118.6
Min nTPM: 73.3
P10809_1006
73.3
P10809_1024
118.6
P10809_1043
92.9
P10809_1062
88.8
P10809_1083
81.8
P10809_1097
96.5
Memory CD4 T-cell nTPM: 98.9
Samples: 6
Max nTPM: 122.4
Min nTPM: 84.3
P10809_1014
85.1
P10809_1026
122.4
P10809_1045
110.1
P10809_1064
84.3
P10809_1086
98.1
P10809_1113
93.1
Memory CD8 T-cell nTPM: 100.4
Samples: 5
Max nTPM: 132.2
Min nTPM: 84.2
P10809_1012
89.8
P10809_1027
132.2
P10809_1046
97.3
P10809_1065
84.2
P10809_1111
98.3
Naive CD4 T-cell nTPM: 97.5
Samples: 6
Max nTPM: 123.9
Min nTPM: 75.1
P10809_1015
75.1
P10809_1030
104.2
P10809_1049
123.9
P10809_1068
94.3
P10809_1085
98.7
P10809_1112
89.0
Naive CD8 T-cell nTPM: 88.7
Samples: 6
Max nTPM: 108.0
Min nTPM: 70.2
P10809_1016
79.9
P10809_1031
108.0
P10809_1050
92.3
P10809_1069
94.9
P10809_1087
86.6
P10809_1110
70.2
T-reg nTPM: 129.6
Samples: 6
Max nTPM: 176.2
Min nTPM: 93.3
P10809_1018
93.3
P10809_1037
176.2
P10809_1056
144.2
P10809_1075
110.1
P10809_1094
110.4
P10809_1106
143.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.2
Samples: 4
Max nTPM: 115.1
Min nTPM: 52.9
RHH5202_R3573
105.2
RHH5230_R3602
63.5
RHH5259_R3631
52.9
RHH5288_R3660
115.1
Effector memory CD8 T-cell nTPM: 103.8
Samples: 4
Max nTPM: 125.8
Min nTPM: 69.6
RHH5203_R3574
125.8
RHH5231_R3603
117.6
RHH5260_R3632
69.6
RHH5289_R3661
102.1
MAIT T-cell nTPM: 93.7
Samples: 4
Max nTPM: 113.0
Min nTPM: 64.7
RHH5233_R3605
113.0
RHH5205_R3576
64.7
RHH5262_R3634
112.3
RHH5297_R3663
84.7
Memory CD4 T-cell TFH nTPM: 116.1
Samples: 4
Max nTPM: 140.5
Min nTPM: 91.4
RHH5300_R3666
91.4
RHH5236_R3608
140.5
RHH5265_R3637
97.8
RHH5208_R3579
134.7
Memory CD4 T-cell Th1 nTPM: 96.6
Samples: 4
Max nTPM: 138.8
Min nTPM: 64.3
RHH5210_R3581
110.6
RHH5302_R3668
138.8
RHH5238_R3610
64.3
RHH5267_R3639
72.5
Memory CD4 T-cell Th1/Th17 nTPM: 100.2
Samples: 4
Max nTPM: 150.0
Min nTPM: 43.6
RHH5303_R3669
132.0
RHH5211_R3582
150.0
RHH5239_R3611
43.6
RHH5268_R3640
75.2
Memory CD4 T-cell Th17 nTPM: 93.8
Samples: 4
Max nTPM: 162.5
Min nTPM: 57.5
RHH5304_R3670
85.0
RHH5212_R3583
162.5
RHH5240_R3612
70.1
RHH5269_R3641
57.5
Memory CD4 T-cell Th2 nTPM: 102.8
Samples: 4
Max nTPM: 116.8
Min nTPM: 86.4
RHH5305_R3671
98.0
RHH5213_R3584
116.8
RHH5241_R3613
109.8
RHH5270_R3642
86.4
Naive CD4 T-cell nTPM: 107.1
Samples: 4
Max nTPM: 139.0
Min nTPM: 72.1
RHH5306_R3672
113.3
RHH5214_R3585
139.0
RHH5242_R3614
104.0
RHH5271_R3643
72.1
Naive CD8 T-cell nTPM: 83.6
Samples: 4
Max nTPM: 112.8
Min nTPM: 52.1
RHH5201_R3572
112.8
RHH5229_R3601
52.1
RHH5258_R3630
94.7
RHH5287_R3659
74.8
Non-Vd2 gdTCR nTPM: 97.2
Samples: 4
Max nTPM: 125.5
Min nTPM: 52.1
RHH5235_R3607
52.1
RHH5264_R3636
125.5
RHH5207_R3578
108.2
RHH5299_R3665
103.1
T-reg nTPM: 102.5
Samples: 4
Max nTPM: 151.0
Min nTPM: 71.3
RHH5301_R3667
90.0
RHH5237_R3609
151.0
RHH5266_R3638
71.3
RHH5209_R3580
97.7
Terminal effector memory CD4 T-cell nTPM: 87.1
Samples: 2
Max nTPM: 111.6
Min nTPM: 62.5
RHH5243_R3615
62.5
RHH5272_R3644
111.6
Terminal effector memory CD8 T-cell nTPM: 99.8
Samples: 4
Max nTPM: 116.5
Min nTPM: 78.9
RHH5232_R3604
87.2
RHH5204_R3575
116.5
RHH5261_R3633
78.9
RHH5296_R3662
116.5
Vd2 gdTCR nTPM: 92.3
Samples: 4
Max nTPM: 110.0
Min nTPM: 71.3
RHH5234_R3606
88.9
RHH5206_R3577
110.0
RHH5263_R3635
71.3
RHH5298_R3664
99.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
