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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
275.8
nTPM
Monaco:
301.1
nTPM
Schmiedel:
158.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
275.8
HPA sample
nTPM
gdT-cell nTPM: 185.6
Samples: 6
Max nTPM: 250.3
Min nTPM: 109.2
P10809_1007
109.2
P10809_1022
250.3
P10809_1041
218.7
P10809_1060
199.8
P10809_1077
177.4
P10809_1098
158.1
MAIT T-cell nTPM: 167.4
Samples: 6
Max nTPM: 222.9
Min nTPM: 115.0
P10809_1006
119.6
P10809_1024
222.9
P10809_1043
182.8
P10809_1062
152.3
P10809_1083
115.0
P10809_1097
211.7
Memory CD4 T-cell nTPM: 199.4
Samples: 6
Max nTPM: 265.2
Min nTPM: 134.0
P10809_1014
134.0
P10809_1026
265.2
P10809_1045
243.9
P10809_1064
172.3
P10809_1086
197.7
P10809_1113
183.4
Memory CD8 T-cell nTPM: 190.8
Samples: 5
Max nTPM: 239.5
Min nTPM: 149.9
P10809_1012
149.9
P10809_1027
239.5
P10809_1046
206.1
P10809_1065
170.4
P10809_1111
188.2
Naive CD4 T-cell nTPM: 209.6
Samples: 6
Max nTPM: 291.4
Min nTPM: 131.3
P10809_1015
131.3
P10809_1030
261.0
P10809_1049
291.4
P10809_1068
195.0
P10809_1085
197.7
P10809_1112
181.2
Naive CD8 T-cell nTPM: 195.9
Samples: 6
Max nTPM: 266.8
Min nTPM: 121.5
P10809_1016
121.5
P10809_1031
266.8
P10809_1050
195.1
P10809_1069
230.9
P10809_1087
183.9
P10809_1110
177.1
T-reg nTPM: 275.8
Samples: 6
Max nTPM: 406.1
Min nTPM: 151.5
P10809_1018
151.5
P10809_1037
306.7
P10809_1056
406.1
P10809_1075
241.5
P10809_1094
260.4
P10809_1106
288.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
301.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 248.6
Samples: 4
Max nTPM: 282.9
Min nTPM: 184.1
RHH5202_R3573
260.0
RHH5230_R3602
282.9
RHH5259_R3631
184.1
RHH5288_R3660
267.2
Effector memory CD8 T-cell nTPM: 301.1
Samples: 4
Max nTPM: 315.0
Min nTPM: 274.2
RHH5203_R3574
315.0
RHH5231_R3603
305.0
RHH5260_R3632
274.2
RHH5289_R3661
310.3
MAIT T-cell nTPM: 233.6
Samples: 4
Max nTPM: 282.6
Min nTPM: 204.4
RHH5233_R3605
214.0
RHH5205_R3576
282.6
RHH5262_R3634
233.4
RHH5297_R3663
204.4
Memory CD4 T-cell TFH nTPM: 285.4
Samples: 4
Max nTPM: 367.4
Min nTPM: 227.8
RHH5300_R3666
227.8
RHH5236_R3608
367.4
RHH5265_R3637
242.1
RHH5208_R3579
304.2
Memory CD4 T-cell Th1 nTPM: 248.5
Samples: 4
Max nTPM: 296.3
Min nTPM: 216.9
RHH5210_R3581
296.3
RHH5302_R3668
236.5
RHH5238_R3610
216.9
RHH5267_R3639
244.3
Memory CD4 T-cell Th1/Th17 nTPM: 253.2
Samples: 4
Max nTPM: 307.7
Min nTPM: 188.4
RHH5303_R3669
290.7
RHH5211_R3582
307.7
RHH5239_R3611
188.4
RHH5268_R3640
226.0
Memory CD4 T-cell Th17 nTPM: 287.3
Samples: 4
Max nTPM: 344.6
Min nTPM: 211.0
RHH5304_R3670
269.3
RHH5212_R3583
324.4
RHH5240_R3612
344.6
RHH5269_R3641
211.0
Memory CD4 T-cell Th2 nTPM: 290.2
Samples: 4
Max nTPM: 378.8
Min nTPM: 245.5
RHH5305_R3671
267.7
RHH5213_R3584
378.8
RHH5241_R3613
268.6
RHH5270_R3642
245.5
Naive CD4 T-cell nTPM: 281.2
Samples: 4
Max nTPM: 351.6
Min nTPM: 237.0
RHH5306_R3672
257.3
RHH5214_R3585
351.6
RHH5242_R3614
279.0
RHH5271_R3643
237.0
Naive CD8 T-cell nTPM: 266.4
Samples: 4
Max nTPM: 361.9
Min nTPM: 190.5
RHH5201_R3572
361.9
RHH5229_R3601
190.5
RHH5258_R3630
239.5
RHH5287_R3659
273.7
Non-Vd2 gdTCR nTPM: 274.1
Samples: 4
Max nTPM: 324.1
Min nTPM: 205.0
RHH5235_R3607
259.1
RHH5264_R3636
308.3
RHH5207_R3578
324.1
RHH5299_R3665
205.0
T-reg nTPM: 272.5
Samples: 4
Max nTPM: 311.8
Min nTPM: 226.0
RHH5301_R3667
244.6
RHH5237_R3609
311.8
RHH5266_R3638
226.0
RHH5209_R3580
307.5
Terminal effector memory CD4 T-cell nTPM: 232.7
Samples: 2
Max nTPM: 234.5
Min nTPM: 230.9
RHH5243_R3615
230.9
RHH5272_R3644
234.5
Terminal effector memory CD8 T-cell nTPM: 262.6
Samples: 4
Max nTPM: 277.8
Min nTPM: 247.8
RHH5232_R3604
252.8
RHH5204_R3575
277.8
RHH5261_R3633
272.1
RHH5296_R3662
247.8
Vd2 gdTCR nTPM: 257.2
Samples: 4
Max nTPM: 320.3
Min nTPM: 194.4
RHH5234_R3606
194.4
RHH5206_R3577
320.3
RHH5263_R3635
285.2
RHH5298_R3664
228.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.