HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.5 nTPM
HPA Brain:64.6 nTPM
GTEx:18.5 nTPM
FANTOM5:6.5 Scaled Tags Per Million
Pig:50.6 nTPM
Mouse:47.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036912
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.6
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
2148 Female, age 91, left hemisphere 63.2
1898 Male, age 80, left hemisphere 58.7
2621 Female, age 67, right hemisphere 54.6
1855 Male, age 76, left hemisphere 49.4
2529 Female, age 94, left hemisphere 44.0
1911 Female, age 85, right hemisphere 40.7
Dentate gyrus
nTPM: 64.6
2531 Female, age 67, both hemispheres 103.9
2246 Female, age 85, both hemispheres 67.3
2528 Male, age 74, both hemispheres 65.2
1927 Female, age 91, both hemispheres 58.6
2530 Female, age 94, left hemisphere 46.7
2010 Male, age 76, both hemispheres 46.0
Entorhinal gyrus
nTPM: 38.3
2686 Male, age 75, right hemisphere 54.1
2764 Male, age 80, right hemisphere 41.7
2117 Female, age 91, right hemisphere 38.7
1938 Female, age 85, left hemisphere 33.2
1787 Male, age 76, left hemisphere 31.6
2613 Female, age 94, left hemisphere 30.7
Hippocampus, CA1
nTPM: 54.7
2045 Male, age 76, both hemispheres 81.3
1873 Female, age 85, both hemispheres 62.5
2082 Female, age 91, right hemisphere 49.5
2527 Male, age 74, both hemispheres 48.3
2749 Male, age 80, left hemisphere 31.7
Hippocampus, CA2
nTPM: 36.0
1963 Male, age 80, left hemisphere 44.7
1892 Male, age 76, both hemispheres 37.4
2113 Female, age 91, right hemisphere 36.9
2437 Female, age 94, left hemisphere 36.2
2249 Male, age 74, both hemispheres 34.9
1940 Female, age 85, left hemisphere 26.0
Hippocampus, CA3
nTPM: 58.6
2620 Female, age 94, left hemisphere 111.3
2861 Female, age 67, both hemispheres 86.5
1891 Female, age 85, both hemispheres 48.8
1867 Male, age 76, both hemispheres 36.6
2137 Male, age 80, left hemisphere 35.8
2436 Male, age 74, both hemispheres 32.6
Parahippocampal cortex
nTPM: 41.9
2622 Female, age 67, right hemisphere 53.0
2250 Female, age 67, right hemisphere 51.1
2693 Female, age 94, both hemispheres 47.9
1933 Female, age 85, both hemispheres 44.1
2245 Female, age 91, both hemispheres 41.5
2532 Female, age 72, left hemisphere 41.2
2018 Male, age 76, both hemispheres 37.5
1850 Male, age 80, both hemispheres 37.1
2692 Male, age 74, both hemispheres 33.2
1990 Female, age 91, right hemisphere 32.4
Perirhinal gyrus
nTPM: 53.2
1841 Female, age 85, right hemisphere 62.9
2521 Female, age 94, right hemisphere 62.1
1794 Male, age 80, right hemisphere 59.3
2848 Male, age 76, right hemisphere 41.5
1847 Female, age 91, left hemisphere 40.3
Subiculum
nTPM: 39.2
2729 Female, age 91, right hemisphere 69.2
1977 Female, age 85, both hemispheres 51.1
2619 Male, age 74, both hemispheres 38.8
2042 Male, age 76, both hemispheres 28.4
1901 Male, age 80, both hemispheres 28.2
2438 Female, age 94, left hemisphere 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 49.1
Min nTPM: 7.2
Std nTPM: 7.7
Median nTPM: 16.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 49.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 45.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 45.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 41.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 40.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 38.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 37.4
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 36.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 36.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 36.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.5
FF:10169-103B7 60 years, female 9.3
FF:10153-102I9 76 years, female 3.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.6
Pig sample Sample description nTPM
Subiculum
nTPM: 25.6
Samples: 4

Max nTPM: 31.5
Min nTPM: 21.8
Sample A Female 31.5
Sample B Female 25.3
Sample C Male 23.7
Sample D Male 21.8
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 22.2
Min nTPM: 12.4
Sample A Female 16.5
Sample B Female 17.0
Sample C Male 22.2
Sample D Male 12.4
Entorhinal cortex
nTPM: 50.6
Samples: 4

Max nTPM: 59.4
Min nTPM: 43.9
Sample A Female 59.4
Sample B Female 52.8
Sample C Male 46.3
Sample D Male 43.9
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 20.5
Min nTPM: 13.9
Sample A Female 13.9
Sample B Female 20.1
Sample C Male 19.4
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.7
Samples: 4

Max nTPM: 52.9
Min nTPM: 37.0
Sample A Male 48.5
Sample B Male 52.2
Sample C Female 37.0
Sample D Female 52.9
Hippocampal formation
nTPM: 36.1
Samples: 4

Max nTPM: 38.4
Min nTPM: 33.4
Sample A Male 35.5
Sample B Male 38.4
Sample C Female 37.0
Sample D Female 33.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
71020389 Antisense, RP_050725_01_A09, Mouse strain C57BL/6J (56 days, male) 2.3
385994 Antisense, RP_040625_01_G02, Mouse strain C57BL/6J (56 days, male) 0.4

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