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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
91.0
nTPM
Monaco:
76.8
nTPM
Schmiedel:
114.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.0
HPA sample
nTPM
gdT-cell nTPM: 57.1
Samples: 6
Max nTPM: 70.0
Min nTPM: 41.5
P10809_1007
41.5
P10809_1022
59.7
P10809_1041
54.2
P10809_1060
61.6
P10809_1077
70.0
P10809_1098
55.8
MAIT T-cell nTPM: 73.3
Samples: 6
Max nTPM: 92.0
Min nTPM: 43.5
P10809_1006
43.5
P10809_1024
92.0
P10809_1043
64.4
P10809_1062
69.5
P10809_1083
79.4
P10809_1097
91.2
Memory CD4 T-cell nTPM: 68.0
Samples: 6
Max nTPM: 77.6
Min nTPM: 50.0
P10809_1014
50.0
P10809_1026
77.6
P10809_1045
66.9
P10809_1064
75.9
P10809_1086
69.7
P10809_1113
68.0
Memory CD8 T-cell nTPM: 66.9
Samples: 5
Max nTPM: 79.2
Min nTPM: 50.7
P10809_1012
50.7
P10809_1027
69.5
P10809_1046
61.7
P10809_1065
73.5
P10809_1111
79.2
Naive CD4 T-cell nTPM: 61.3
Samples: 6
Max nTPM: 80.3
Min nTPM: 41.2
P10809_1015
41.2
P10809_1030
68.5
P10809_1049
80.3
P10809_1068
58.5
P10809_1085
62.0
P10809_1112
57.2
Naive CD8 T-cell nTPM: 67.6
Samples: 6
Max nTPM: 87.7
Min nTPM: 43.8
P10809_1016
43.8
P10809_1031
74.2
P10809_1050
70.9
P10809_1069
65.8
P10809_1087
87.7
P10809_1110
62.9
T-reg nTPM: 91.0
Samples: 6
Max nTPM: 105.5
Min nTPM: 62.4
P10809_1018
62.4
P10809_1037
92.3
P10809_1056
105.5
P10809_1075
100.5
P10809_1094
95.3
P10809_1106
90.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.1
Samples: 4
Max nTPM: 69.1
Min nTPM: 28.8
RHH5202_R3573
69.1
RHH5230_R3602
28.8
RHH5259_R3631
30.1
RHH5288_R3660
68.5
Effector memory CD8 T-cell nTPM: 76.6
Samples: 4
Max nTPM: 89.1
Min nTPM: 57.9
RHH5203_R3574
85.3
RHH5231_R3603
74.1
RHH5260_R3632
57.9
RHH5289_R3661
89.1
MAIT T-cell nTPM: 62.4
Samples: 4
Max nTPM: 77.4
Min nTPM: 49.7
RHH5233_R3605
51.7
RHH5205_R3576
77.4
RHH5262_R3634
70.8
RHH5297_R3663
49.7
Memory CD4 T-cell TFH nTPM: 68.1
Samples: 4
Max nTPM: 100.9
Min nTPM: 55.2
RHH5300_R3666
59.1
RHH5236_R3608
100.9
RHH5265_R3637
55.2
RHH5208_R3579
57.1
Memory CD4 T-cell Th1 nTPM: 56.3
Samples: 4
Max nTPM: 66.8
Min nTPM: 49.8
RHH5210_R3581
52.8
RHH5302_R3668
66.8
RHH5238_R3610
49.8
RHH5267_R3639
55.9
Memory CD4 T-cell Th1/Th17 nTPM: 52.8
Samples: 4
Max nTPM: 82.3
Min nTPM: 12.3
RHH5303_R3669
82.3
RHH5211_R3582
78.8
RHH5239_R3611
12.3
RHH5268_R3640
37.9
Memory CD4 T-cell Th17 nTPM: 59.4
Samples: 4
Max nTPM: 81.0
Min nTPM: 34.5
RHH5304_R3670
77.6
RHH5212_R3583
81.0
RHH5240_R3612
44.5
RHH5269_R3641
34.5
Memory CD4 T-cell Th2 nTPM: 65.3
Samples: 4
Max nTPM: 96.9
Min nTPM: 46.2
RHH5305_R3671
60.4
RHH5213_R3584
96.9
RHH5241_R3613
57.5
RHH5270_R3642
46.2
Naive CD4 T-cell nTPM: 64.3
Samples: 4
Max nTPM: 71.2
Min nTPM: 51.7
RHH5306_R3672
63.8
RHH5214_R3585
71.2
RHH5242_R3614
70.3
RHH5271_R3643
51.7
Naive CD8 T-cell nTPM: 54.2
Samples: 4
Max nTPM: 79.6
Min nTPM: 23.6
RHH5201_R3572
67.6
RHH5229_R3601
23.6
RHH5258_R3630
79.6
RHH5287_R3659
46.1
Non-Vd2 gdTCR nTPM: 63.4
Samples: 4
Max nTPM: 80.7
Min nTPM: 48.8
RHH5235_R3607
48.8
RHH5264_R3636
62.2
RHH5207_R3578
80.7
RHH5299_R3665
61.8
T-reg nTPM: 62.0
Samples: 4
Max nTPM: 94.1
Min nTPM: 46.0
RHH5301_R3667
55.3
RHH5237_R3609
94.1
RHH5266_R3638
46.0
RHH5209_R3580
52.5
Terminal effector memory CD4 T-cell nTPM: 46.7
Samples: 2
Max nTPM: 53.3
Min nTPM: 40.1
RHH5243_R3615
40.1
RHH5272_R3644
53.3
Terminal effector memory CD8 T-cell nTPM: 76.8
Samples: 4
Max nTPM: 98.9
Min nTPM: 46.4
RHH5232_R3604
98.9
RHH5204_R3575
78.1
RHH5261_R3633
46.4
RHH5296_R3662
83.6
Vd2 gdTCR nTPM: 66.1
Samples: 4
Max nTPM: 87.2
Min nTPM: 55.5
RHH5234_R3606
57.9
RHH5206_R3577
87.2
RHH5263_R3635
55.5
RHH5298_R3664
63.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
