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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
37.8
nTPM
Monaco:
177.4
nTPM
Schmiedel:
462.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.8
HPA sample
nTPM
gdT-cell nTPM: 29.2
Samples: 6
Max nTPM: 36.2
Min nTPM: 20.3
P10809_1007
20.3
P10809_1022
32.9
P10809_1041
28.3
P10809_1060
29.4
P10809_1077
28.0
P10809_1098
36.2
MAIT T-cell nTPM: 21.1
Samples: 6
Max nTPM: 30.1
Min nTPM: 16.9
P10809_1006
23.9
P10809_1024
17.2
P10809_1043
20.7
P10809_1062
17.9
P10809_1083
16.9
P10809_1097
30.1
Memory CD4 T-cell nTPM: 18.4
Samples: 6
Max nTPM: 25.4
Min nTPM: 11.8
P10809_1014
14.3
P10809_1026
11.8
P10809_1045
15.5
P10809_1064
23.5
P10809_1086
25.4
P10809_1113
19.6
Memory CD8 T-cell nTPM: 22.8
Samples: 5
Max nTPM: 31.6
Min nTPM: 18.2
P10809_1012
19.3
P10809_1027
18.3
P10809_1046
18.2
P10809_1065
31.6
P10809_1111
26.7
Naive CD4 T-cell nTPM: 24.1
Samples: 6
Max nTPM: 27.6
Min nTPM: 18.5
P10809_1015
27.6
P10809_1030
23.9
P10809_1049
23.8
P10809_1068
18.5
P10809_1085
25.9
P10809_1112
25.0
Naive CD8 T-cell nTPM: 37.8
Samples: 6
Max nTPM: 48.2
Min nTPM: 23.8
P10809_1016
23.8
P10809_1031
39.1
P10809_1050
43.8
P10809_1069
34.7
P10809_1087
48.2
P10809_1110
37.0
T-reg nTPM: 21.9
Samples: 6
Max nTPM: 34.4
Min nTPM: 10.1
P10809_1018
18.6
P10809_1037
20.0
P10809_1056
17.8
P10809_1075
10.1
P10809_1094
30.6
P10809_1106
34.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
177.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.8
Samples: 4
Max nTPM: 105.7
Min nTPM: 62.8
RHH5202_R3573
94.5
RHH5230_R3602
105.7
RHH5259_R3631
76.1
RHH5288_R3660
62.8
Effector memory CD8 T-cell nTPM: 141.0
Samples: 4
Max nTPM: 183.6
Min nTPM: 107.3
RHH5203_R3574
107.3
RHH5231_R3603
183.6
RHH5260_R3632
147.7
RHH5289_R3661
125.5
MAIT T-cell nTPM: 129.8
Samples: 4
Max nTPM: 167.4
Min nTPM: 86.9
RHH5233_R3605
167.4
RHH5205_R3576
163.0
RHH5262_R3634
86.9
RHH5297_R3663
102.0
Memory CD4 T-cell TFH nTPM: 122.6
Samples: 4
Max nTPM: 187.5
Min nTPM: 69.7
RHH5300_R3666
72.3
RHH5236_R3608
187.5
RHH5265_R3637
69.7
RHH5208_R3579
161.0
Memory CD4 T-cell Th1 nTPM: 102.7
Samples: 4
Max nTPM: 143.0
Min nTPM: 74.2
RHH5210_R3581
115.6
RHH5302_R3668
74.2
RHH5238_R3610
143.0
RHH5267_R3639
77.8
Memory CD4 T-cell Th1/Th17 nTPM: 109.3
Samples: 4
Max nTPM: 137.4
Min nTPM: 69.5
RHH5303_R3669
101.5
RHH5211_R3582
128.6
RHH5239_R3611
137.4
RHH5268_R3640
69.5
Memory CD4 T-cell Th17 nTPM: 114.9
Samples: 4
Max nTPM: 180.2
Min nTPM: 59.6
RHH5304_R3670
91.7
RHH5212_R3583
127.9
RHH5240_R3612
180.2
RHH5269_R3641
59.6
Memory CD4 T-cell Th2 nTPM: 78.5
Samples: 4
Max nTPM: 102.8
Min nTPM: 43.7
RHH5305_R3671
67.6
RHH5213_R3584
102.8
RHH5241_R3613
99.8
RHH5270_R3642
43.7
Naive CD4 T-cell nTPM: 117.9
Samples: 4
Max nTPM: 158.5
Min nTPM: 74.5
RHH5306_R3672
94.2
RHH5214_R3585
144.4
RHH5242_R3614
158.5
RHH5271_R3643
74.5
Naive CD8 T-cell nTPM: 170.6
Samples: 4
Max nTPM: 252.1
Min nTPM: 114.5
RHH5201_R3572
186.2
RHH5229_R3601
252.1
RHH5258_R3630
114.5
RHH5287_R3659
129.7
Non-Vd2 gdTCR nTPM: 135.8
Samples: 4
Max nTPM: 187.7
Min nTPM: 90.0
RHH5235_R3607
150.4
RHH5264_R3636
115.1
RHH5207_R3578
187.7
RHH5299_R3665
90.0
T-reg nTPM: 159.2
Samples: 4
Max nTPM: 220.1
Min nTPM: 100.9
RHH5301_R3667
104.4
RHH5237_R3609
211.4
RHH5266_R3638
100.9
RHH5209_R3580
220.1
Terminal effector memory CD4 T-cell nTPM: 177.4
Samples: 2
Max nTPM: 204.8
Min nTPM: 149.9
RHH5243_R3615
204.8
RHH5272_R3644
149.9
Terminal effector memory CD8 T-cell nTPM: 138.8
Samples: 4
Max nTPM: 163.6
Min nTPM: 111.7
RHH5232_R3604
163.6
RHH5204_R3575
111.7
RHH5261_R3633
149.8
RHH5296_R3662
129.9
Vd2 gdTCR nTPM: 125.5
Samples: 4
Max nTPM: 162.0
Min nTPM: 89.1
RHH5234_R3606
112.3
RHH5206_R3577
162.0
RHH5263_R3635
138.6
RHH5298_R3664
89.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
