HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.9 nTPM
HPA Brain:34.1 nTPM
GTEx:26.9 nTPM
FANTOM5:44.3 Scaled Tags Per Million
Pig:39.9 nTPM
Mouse:70.5 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044564Antibody HPA055841
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.7
1898 Male, age 80, left hemisphere 41.9
2529 Female, age 94, left hemisphere 34.1
1911 Female, age 85, right hemisphere 33.6
1855 Male, age 76, left hemisphere 32.8
2621 Female, age 67, right hemisphere 30.6
2148 Female, age 91, left hemisphere 29.1
Dentate gyrus
nTPM: 31.8
2010 Male, age 76, both hemispheres 36.0
1927 Female, age 91, both hemispheres 33.5
2528 Male, age 74, both hemispheres 33.5
2530 Female, age 94, left hemisphere 32.7
2246 Female, age 85, both hemispheres 29.8
2531 Female, age 67, both hemispheres 25.4
Entorhinal gyrus
nTPM: 30.5
1938 Female, age 85, left hemisphere 35.7
2117 Female, age 91, right hemisphere 34.8
1787 Male, age 76, left hemisphere 30.0
2613 Female, age 94, left hemisphere 28.4
2764 Male, age 80, right hemisphere 28.2
2686 Male, age 75, right hemisphere 26.0
Hippocampus, CA1
nTPM: 34.1
2749 Male, age 80, left hemisphere 43.7
1873 Female, age 85, both hemispheres 34.8
2527 Male, age 74, both hemispheres 33.0
2082 Female, age 91, right hemisphere 29.5
2045 Male, age 76, both hemispheres 29.3
Hippocampus, CA2
nTPM: 34.0
1963 Male, age 80, left hemisphere 38.4
2249 Male, age 74, both hemispheres 36.3
1940 Female, age 85, left hemisphere 36.0
1892 Male, age 76, both hemispheres 33.0
2437 Female, age 94, left hemisphere 30.2
2113 Female, age 91, right hemisphere 29.8
Hippocampus, CA3
nTPM: 32.7
2436 Male, age 74, both hemispheres 38.8
2137 Male, age 80, left hemisphere 34.9
1891 Female, age 85, both hemispheres 34.2
1867 Male, age 76, both hemispheres 33.4
2861 Female, age 67, both hemispheres 28.6
2620 Female, age 94, left hemisphere 26.2
Parahippocampal cortex
nTPM: 30.1
1990 Female, age 91, right hemisphere 33.5
1850 Male, age 80, both hemispheres 32.5
2250 Female, age 67, right hemisphere 32.4
1933 Female, age 85, both hemispheres 32.2
2692 Male, age 74, both hemispheres 31.6
2532 Female, age 72, left hemisphere 30.1
2245 Female, age 91, both hemispheres 29.3
2693 Female, age 94, both hemispheres 29.1
2018 Male, age 76, both hemispheres 28.3
2622 Female, age 67, right hemisphere 22.4
Perirhinal gyrus
nTPM: 31.1
1841 Female, age 85, right hemisphere 34.1
1847 Female, age 91, left hemisphere 33.7
1794 Male, age 80, right hemisphere 30.8
2521 Female, age 94, right hemisphere 30.4
2848 Male, age 76, right hemisphere 26.5
Subiculum
nTPM: 33.6
2042 Male, age 76, both hemispheres 36.7
1901 Male, age 80, both hemispheres 36.4
1977 Female, age 85, both hemispheres 35.0
2729 Female, age 91, right hemisphere 32.3
2438 Female, age 94, left hemisphere 31.2
2619 Male, age 74, both hemispheres 30.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.9
Samples: 197

Max nTPM: 42.4
Min nTPM: 17.9
Std nTPM: 3.9
Median nTPM: 26.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 42.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 40.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 36.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 36.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 35.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 34.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 34.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 34.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.3
FF:10153-102I9 76 years, female 53.3
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.9
Pig sample Sample description nTPM
Subiculum
nTPM: 36.7
Samples: 4

Max nTPM: 45.0
Min nTPM: 33.7
Sample A Female 45.0
Sample B Female 33.7
Sample C Male 34.0
Sample D Male 34.1
Dorsal hippocampus
nTPM: 40.0
Samples: 4

Max nTPM: 50.1
Min nTPM: 30.9
Sample A Female 50.1
Sample B Female 39.2
Sample C Male 39.7
Sample D Male 30.9
Entorhinal cortex
nTPM: 36.4
Samples: 4

Max nTPM: 38.3
Min nTPM: 31.5
Sample A Female 38.3
Sample B Female 38.3
Sample C Male 37.6
Sample D Male 31.5
Ventral hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 41.8
Min nTPM: 30.2
Sample A Female 41.8
Sample B Female 30.2
Sample C Male 39.9
Sample D Male 37.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 77.0
Min nTPM: 65.8
Sample A Male 65.8
Sample B Male 73.0
Sample C Female 66.1
Sample D Female 77.0
Hippocampal formation
nTPM: 69.1
Samples: 4

Max nTPM: 75.1
Min nTPM: 64.3
Sample A Male 65.3
Sample B Male 71.7
Sample C Female 75.1
Sample D Female 64.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69013483 Antisense, RP_050309_02_E01, Mouse strain C57BL/6J (56 days, male) 1.6
70794037 Antisense, RP_050712_01_C04, Mouse strain C57BL/6J (56 days, male) 0.5

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