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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
345.7
nTPM
Monaco:
103.0
nTPM
Schmiedel:
126.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
345.7
HPA sample
nTPM
gdT-cell nTPM: 165.2
Samples: 6
Max nTPM: 201.5
Min nTPM: 115.7
P10809_1007
176.5
P10809_1022
115.7
P10809_1041
164.4
P10809_1060
170.8
P10809_1077
201.5
P10809_1098
162.2
MAIT T-cell nTPM: 151.7
Samples: 6
Max nTPM: 179.9
Min nTPM: 135.3
P10809_1006
135.3
P10809_1024
179.9
P10809_1043
139.4
P10809_1062
140.8
P10809_1083
141.6
P10809_1097
173.3
Memory CD4 T-cell nTPM: 216.7
Samples: 6
Max nTPM: 244.9
Min nTPM: 196.5
P10809_1014
210.5
P10809_1026
198.9
P10809_1045
196.5
P10809_1064
244.9
P10809_1086
228.1
P10809_1113
221.0
Memory CD8 T-cell nTPM: 219.8
Samples: 5
Max nTPM: 253.9
Min nTPM: 181.2
P10809_1012
191.9
P10809_1027
237.8
P10809_1046
181.2
P10809_1065
253.9
P10809_1111
234.4
Naive CD4 T-cell nTPM: 168.7
Samples: 6
Max nTPM: 187.8
Min nTPM: 148.2
P10809_1015
166.0
P10809_1030
166.1
P10809_1049
148.2
P10809_1068
171.3
P10809_1085
187.8
P10809_1112
172.9
Naive CD8 T-cell nTPM: 195.8
Samples: 6
Max nTPM: 249.8
Min nTPM: 161.5
P10809_1016
167.2
P10809_1031
202.8
P10809_1050
178.2
P10809_1069
215.4
P10809_1087
249.8
P10809_1110
161.5
T-reg nTPM: 345.7
Samples: 6
Max nTPM: 409.9
Min nTPM: 234.1
P10809_1018
308.2
P10809_1037
409.9
P10809_1056
234.1
P10809_1075
348.1
P10809_1094
371.5
P10809_1106
402.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 91.5
Samples: 4
Max nTPM: 111.1
Min nTPM: 56.7
RHH5202_R3573
100.7
RHH5230_R3602
56.7
RHH5259_R3631
111.1
RHH5288_R3660
97.6
Effector memory CD8 T-cell nTPM: 95.3
Samples: 4
Max nTPM: 115.3
Min nTPM: 60.8
RHH5203_R3574
98.8
RHH5231_R3603
60.8
RHH5260_R3632
115.3
RHH5289_R3661
106.2
MAIT T-cell nTPM: 41.6
Samples: 4
Max nTPM: 53.9
Min nTPM: 35.1
RHH5233_R3605
35.1
RHH5205_R3576
53.9
RHH5262_R3634
40.2
RHH5297_R3663
37.3
Memory CD4 T-cell TFH nTPM: 95.7
Samples: 4
Max nTPM: 134.4
Min nTPM: 67.8
RHH5300_R3666
67.8
RHH5236_R3608
134.4
RHH5265_R3637
79.8
RHH5208_R3579
100.8
Memory CD4 T-cell Th1 nTPM: 88.9
Samples: 4
Max nTPM: 112.8
Min nTPM: 73.5
RHH5210_R3581
73.5
RHH5302_R3668
75.4
RHH5238_R3610
112.8
RHH5267_R3639
93.9
Memory CD4 T-cell Th1/Th17 nTPM: 84.5
Samples: 4
Max nTPM: 112.1
Min nTPM: 63.4
RHH5303_R3669
63.4
RHH5211_R3582
94.3
RHH5239_R3611
68.3
RHH5268_R3640
112.1
Memory CD4 T-cell Th17 nTPM: 80.3
Samples: 4
Max nTPM: 89.9
Min nTPM: 74.4
RHH5304_R3670
82.2
RHH5212_R3583
74.4
RHH5240_R3612
74.7
RHH5269_R3641
89.9
Memory CD4 T-cell Th2 nTPM: 103.0
Samples: 4
Max nTPM: 109.5
Min nTPM: 99.8
RHH5305_R3671
100.7
RHH5213_R3584
109.5
RHH5241_R3613
101.9
RHH5270_R3642
99.8
Naive CD4 T-cell nTPM: 68.4
Samples: 4
Max nTPM: 91.4
Min nTPM: 46.3
RHH5306_R3672
73.4
RHH5214_R3585
91.4
RHH5242_R3614
46.3
RHH5271_R3643
62.4
Naive CD8 T-cell nTPM: 62.2
Samples: 4
Max nTPM: 78.6
Min nTPM: 43.7
RHH5201_R3572
68.6
RHH5229_R3601
57.8
RHH5258_R3630
78.6
RHH5287_R3659
43.7
Non-Vd2 gdTCR nTPM: 86.7
Samples: 4
Max nTPM: 123.8
Min nTPM: 52.4
RHH5235_R3607
102.3
RHH5264_R3636
123.8
RHH5207_R3578
52.4
RHH5299_R3665
68.4
T-reg nTPM: 89.0
Samples: 4
Max nTPM: 107.3
Min nTPM: 78.5
RHH5301_R3667
107.3
RHH5237_R3609
89.6
RHH5266_R3638
80.5
RHH5209_R3580
78.5
Terminal effector memory CD4 T-cell nTPM: 80.9
Samples: 2
Max nTPM: 87.9
Min nTPM: 73.9
RHH5243_R3615
87.9
RHH5272_R3644
73.9
Terminal effector memory CD8 T-cell nTPM: 95.8
Samples: 4
Max nTPM: 147.8
Min nTPM: 44.4
RHH5232_R3604
44.4
RHH5204_R3575
147.8
RHH5261_R3633
115.2
RHH5296_R3662
75.9
Vd2 gdTCR nTPM: 70.6
Samples: 4
Max nTPM: 104.2
Min nTPM: 46.4
RHH5234_R3606
62.5
RHH5206_R3577
104.2
RHH5263_R3635
69.2
RHH5298_R3664
46.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
