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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.7
nTPM
Monaco:
53.2
nTPM
Schmiedel:
123.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.7
HPA sample
nTPM
gdT-cell nTPM: 34.2
Samples: 6
Max nTPM: 41.8
Min nTPM: 21.5
P10809_1007
21.5
P10809_1022
30.8
P10809_1041
38.7
P10809_1060
40.4
P10809_1077
32.1
P10809_1098
41.8
MAIT T-cell nTPM: 49.5
Samples: 6
Max nTPM: 66.8
Min nTPM: 30.5
P10809_1006
30.5
P10809_1024
66.8
P10809_1043
42.6
P10809_1062
44.7
P10809_1083
54.3
P10809_1097
58.1
Memory CD4 T-cell nTPM: 42.7
Samples: 6
Max nTPM: 54.4
Min nTPM: 28.0
P10809_1014
28.0
P10809_1026
47.9
P10809_1045
44.5
P10809_1064
34.8
P10809_1086
54.4
P10809_1113
46.4
Memory CD8 T-cell nTPM: 43.6
Samples: 5
Max nTPM: 70.0
Min nTPM: 25.5
P10809_1012
25.5
P10809_1027
47.3
P10809_1046
32.9
P10809_1065
42.1
P10809_1111
70.0
Naive CD4 T-cell nTPM: 52.7
Samples: 6
Max nTPM: 69.0
Min nTPM: 36.9
P10809_1015
36.9
P10809_1030
47.0
P10809_1049
69.0
P10809_1068
55.2
P10809_1085
57.1
P10809_1112
50.9
Naive CD8 T-cell nTPM: 46.3
Samples: 6
Max nTPM: 60.2
Min nTPM: 30.3
P10809_1016
30.3
P10809_1031
60.2
P10809_1050
42.5
P10809_1069
47.2
P10809_1087
47.0
P10809_1110
50.7
T-reg nTPM: 43.3
Samples: 6
Max nTPM: 58.9
Min nTPM: 20.7
P10809_1018
20.7
P10809_1037
34.3
P10809_1056
58.9
P10809_1075
49.2
P10809_1094
46.4
P10809_1106
50.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 33.4
Samples: 4
Max nTPM: 41.8
Min nTPM: 28.3
RHH5202_R3573
41.8
RHH5230_R3602
30.0
RHH5259_R3631
28.3
RHH5288_R3660
33.5
Effector memory CD8 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 50.5
Min nTPM: 22.3
RHH5203_R3574
50.5
RHH5231_R3603
32.6
RHH5260_R3632
22.3
RHH5289_R3661
43.6
MAIT T-cell nTPM: 36.5
Samples: 4
Max nTPM: 49.5
Min nTPM: 31.4
RHH5233_R3605
32.6
RHH5205_R3576
31.4
RHH5262_R3634
32.6
RHH5297_R3663
49.5
Memory CD4 T-cell TFH nTPM: 53.2
Samples: 4
Max nTPM: 67.8
Min nTPM: 29.4
RHH5300_R3666
29.4
RHH5236_R3608
65.5
RHH5265_R3637
50.1
RHH5208_R3579
67.8
Memory CD4 T-cell Th1 nTPM: 30.7
Samples: 4
Max nTPM: 40.4
Min nTPM: 22.9
RHH5210_R3581
40.4
RHH5302_R3668
22.9
RHH5238_R3610
34.3
RHH5267_R3639
25.3
Memory CD4 T-cell Th1/Th17 nTPM: 35.5
Samples: 4
Max nTPM: 47.4
Min nTPM: 23.7
RHH5303_R3669
43.2
RHH5211_R3582
47.4
RHH5239_R3611
23.7
RHH5268_R3640
27.7
Memory CD4 T-cell Th17 nTPM: 34.5
Samples: 4
Max nTPM: 47.5
Min nTPM: 26.6
RHH5304_R3670
35.7
RHH5212_R3583
47.5
RHH5240_R3612
28.3
RHH5269_R3641
26.6
Memory CD4 T-cell Th2 nTPM: 37.9
Samples: 4
Max nTPM: 46.7
Min nTPM: 33.1
RHH5305_R3671
35.4
RHH5213_R3584
46.7
RHH5241_R3613
33.1
RHH5270_R3642
36.4
Naive CD4 T-cell nTPM: 43.3
Samples: 4
Max nTPM: 55.9
Min nTPM: 28.4
RHH5306_R3672
28.4
RHH5214_R3585
55.9
RHH5242_R3614
43.0
RHH5271_R3643
46.0
Naive CD8 T-cell nTPM: 46.6
Samples: 4
Max nTPM: 71.7
Min nTPM: 18.6
RHH5201_R3572
71.7
RHH5229_R3601
18.6
RHH5258_R3630
58.1
RHH5287_R3659
37.8
Non-Vd2 gdTCR nTPM: 31.5
Samples: 4
Max nTPM: 46.9
Min nTPM: 18.9
RHH5235_R3607
18.9
RHH5264_R3636
46.9
RHH5207_R3578
34.7
RHH5299_R3665
25.4
T-reg nTPM: 41.1
Samples: 4
Max nTPM: 46.0
Min nTPM: 34.1
RHH5301_R3667
39.9
RHH5237_R3609
44.3
RHH5266_R3638
34.1
RHH5209_R3580
46.0
Terminal effector memory CD4 T-cell nTPM: 35.4
Samples: 2
Max nTPM: 47.1
Min nTPM: 23.7
RHH5243_R3615
23.7
RHH5272_R3644
47.1
Terminal effector memory CD8 T-cell nTPM: 34.9
Samples: 4
Max nTPM: 47.0
Min nTPM: 20.2
RHH5232_R3604
36.8
RHH5204_R3575
47.0
RHH5261_R3633
20.2
RHH5296_R3662
35.7
Vd2 gdTCR nTPM: 36.5
Samples: 4
Max nTPM: 47.1
Min nTPM: 25.9
RHH5234_R3606
37.0
RHH5206_R3577
47.1
RHH5263_R3635
25.9
RHH5298_R3664
36.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
