HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:55.0 nTPM
HPA Brain:123.7 nTPM
GTEx:55.0 nTPM
FANTOM5:130.0 Scaled Tags Per Million
Pig:90.7 nTPM
Mouse:122.7 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043236Antibody CAB003848
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.7
Sample id Sample description nTPM
Hippocampus
nTPM: 92.5
1898 Male, age 80, left hemisphere 139.2
1855 Male, age 76, left hemisphere 98.5
2621 Female, age 67, right hemisphere 87.6
1911 Female, age 85, right hemisphere 80.6
2148 Female, age 91, left hemisphere 75.5
2529 Female, age 94, left hemisphere 73.9
Dentate gyrus
nTPM: 95.2
1927 Female, age 91, both hemispheres 128.8
2010 Male, age 76, both hemispheres 113.2
2528 Male, age 74, both hemispheres 94.0
2246 Female, age 85, both hemispheres 92.6
2530 Female, age 94, left hemisphere 80.2
2531 Female, age 67, both hemispheres 62.3
Entorhinal gyrus
nTPM: 84.5
1938 Female, age 85, left hemisphere 110.0
2764 Male, age 80, right hemisphere 92.8
1787 Male, age 76, left hemisphere 91.5
2613 Female, age 94, left hemisphere 82.6
2117 Female, age 91, right hemisphere 72.5
2686 Male, age 75, right hemisphere 57.7
Hippocampus, CA1
nTPM: 107.3
2749 Male, age 80, left hemisphere 168.7
1873 Female, age 85, both hemispheres 119.7
2527 Male, age 74, both hemispheres 93.8
2045 Male, age 76, both hemispheres 87.2
2082 Female, age 91, right hemisphere 67.3
Hippocampus, CA2
nTPM: 100.1
1892 Male, age 76, both hemispheres 128.4
1963 Male, age 80, left hemisphere 119.9
2249 Male, age 74, both hemispheres 113.0
1940 Female, age 85, left hemisphere 91.5
2437 Female, age 94, left hemisphere 80.6
2113 Female, age 91, right hemisphere 67.0
Hippocampus, CA3
nTPM: 98.7
2137 Male, age 80, left hemisphere 132.7
1867 Male, age 76, both hemispheres 113.6
2436 Male, age 74, both hemispheres 104.3
1891 Female, age 85, both hemispheres 96.9
2620 Female, age 94, left hemisphere 86.0
2861 Female, age 67, both hemispheres 58.8
Parahippocampal cortex
nTPM: 94.4
1850 Male, age 80, both hemispheres 132.2
1933 Female, age 85, both hemispheres 108.7
2250 Female, age 67, right hemisphere 108.3
1990 Female, age 91, right hemisphere 107.0
2693 Female, age 94, both hemispheres 98.9
2532 Female, age 72, left hemisphere 92.9
2245 Female, age 91, both hemispheres 88.2
2018 Male, age 76, both hemispheres 85.1
2692 Male, age 74, both hemispheres 71.0
2622 Female, age 67, right hemisphere 51.2
Perirhinal gyrus
nTPM: 123.7
1847 Female, age 91, left hemisphere 150.1
1841 Female, age 85, right hemisphere 134.2
1794 Male, age 80, right hemisphere 125.5
2521 Female, age 94, right hemisphere 119.5
2848 Male, age 76, right hemisphere 88.9
Subiculum
nTPM: 88.0
1977 Female, age 85, both hemispheres 106.9
1901 Male, age 80, both hemispheres 100.4
2438 Female, age 94, left hemisphere 93.4
2042 Male, age 76, both hemispheres 80.4
2619 Male, age 74, both hemispheres 77.6
2729 Female, age 91, right hemisphere 69.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.0
Samples: 197

Max nTPM: 123.1
Min nTPM: 27.3
Std nTPM: 17.0
Median nTPM: 51.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 123.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 110.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 98.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 96.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 94.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 90.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 90.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 89.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 87.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 87.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 87.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.0
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 113.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.7
Pig sample Sample description nTPM
Subiculum
nTPM: 82.1
Samples: 4

Max nTPM: 99.4
Min nTPM: 74.0
Sample A Female 99.4
Sample B Female 76.8
Sample C Male 74.0
Sample D Male 78.1
Dorsal hippocampus
nTPM: 90.7
Samples: 4

Max nTPM: 115.0
Min nTPM: 71.0
Sample A Female 115.0
Sample B Female 91.8
Sample C Male 85.0
Sample D Male 71.0
Entorhinal cortex
nTPM: 80.8
Samples: 4

Max nTPM: 92.1
Min nTPM: 72.3
Sample A Female 80.7
Sample B Female 92.1
Sample C Male 78.1
Sample D Male 72.3
Ventral hippocampus
nTPM: 77.3
Samples: 4

Max nTPM: 91.8
Min nTPM: 62.9
Sample A Female 91.8
Sample B Female 62.9
Sample C Male 75.3
Sample D Male 79.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.9
Samples: 4

Max nTPM: 117.5
Min nTPM: 109.8
Sample A Male 109.8
Sample B Male 115.7
Sample C Female 116.4
Sample D Female 117.5
Hippocampal formation
nTPM: 122.7
Samples: 4

Max nTPM: 130.5
Min nTPM: 114.2
Sample A Male 129.2
Sample B Male 116.8
Sample C Female 130.5
Sample D Female 114.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
71836836 Antisense, RP_051017_02_B11, Mouse strain C57BL/6J (56 days, male) 18.9
67978736 Antisense, RP_040923_01_G05, Mouse strain C57BL/6J (56 days, male) 8.5

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