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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
118.6
nTPM
Monaco:
335.1
nTPM
Schmiedel:
170.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.6
HPA sample
nTPM
gdT-cell nTPM: 80.3
Samples: 6
Max nTPM: 99.3
Min nTPM: 36.8
P10809_1007
89.5
P10809_1022
92.7
P10809_1041
65.7
P10809_1060
36.8
P10809_1077
99.3
P10809_1098
97.5
MAIT T-cell nTPM: 99.2
Samples: 6
Max nTPM: 127.6
Min nTPM: 73.7
P10809_1006
124.3
P10809_1024
73.7
P10809_1043
81.7
P10809_1062
94.9
P10809_1083
93.1
P10809_1097
127.6
Memory CD4 T-cell nTPM: 88.0
Samples: 6
Max nTPM: 107.4
Min nTPM: 52.7
P10809_1014
107.4
P10809_1026
91.6
P10809_1045
94.7
P10809_1064
98.3
P10809_1086
83.1
P10809_1113
52.7
Memory CD8 T-cell nTPM: 103.6
Samples: 5
Max nTPM: 122.8
Min nTPM: 84.7
P10809_1012
122.8
P10809_1027
84.7
P10809_1046
89.7
P10809_1065
100.4
P10809_1111
120.4
Naive CD4 T-cell nTPM: 100.1
Samples: 6
Max nTPM: 118.1
Min nTPM: 86.8
P10809_1015
118.1
P10809_1030
99.6
P10809_1049
96.6
P10809_1068
108.1
P10809_1085
91.3
P10809_1112
86.8
Naive CD8 T-cell nTPM: 92.7
Samples: 6
Max nTPM: 110.1
Min nTPM: 50.6
P10809_1016
106.1
P10809_1031
89.1
P10809_1050
92.5
P10809_1069
110.1
P10809_1087
50.6
P10809_1110
107.7
T-reg nTPM: 118.6
Samples: 6
Max nTPM: 160.1
Min nTPM: 59.6
P10809_1018
111.5
P10809_1037
133.2
P10809_1056
123.0
P10809_1075
124.0
P10809_1094
59.6
P10809_1106
160.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
335.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 229.3
Samples: 4
Max nTPM: 353.2
Min nTPM: 92.6
RHH5202_R3573
92.6
RHH5230_R3602
353.2
RHH5259_R3631
274.9
RHH5288_R3660
196.4
Effector memory CD8 T-cell nTPM: 256.1
Samples: 4
Max nTPM: 335.5
Min nTPM: 136.4
RHH5203_R3574
248.1
RHH5231_R3603
304.2
RHH5260_R3632
335.5
RHH5289_R3661
136.4
MAIT T-cell nTPM: 292.3
Samples: 4
Max nTPM: 365.9
Min nTPM: 212.7
RHH5233_R3605
212.7
RHH5205_R3576
343.4
RHH5262_R3634
365.9
RHH5297_R3663
247.2
Memory CD4 T-cell TFH nTPM: 259.3
Samples: 4
Max nTPM: 394.7
Min nTPM: 100.4
RHH5300_R3666
280.2
RHH5236_R3608
394.7
RHH5265_R3637
261.7
RHH5208_R3579
100.4
Memory CD4 T-cell Th1 nTPM: 247.7
Samples: 4
Max nTPM: 369.9
Min nTPM: 157.6
RHH5210_R3581
157.6
RHH5302_R3668
198.7
RHH5238_R3610
264.6
RHH5267_R3639
369.9
Memory CD4 T-cell Th1/Th17 nTPM: 245.6
Samples: 4
Max nTPM: 367.0
Min nTPM: 90.7
RHH5303_R3669
90.7
RHH5211_R3582
367.0
RHH5239_R3611
232.5
RHH5268_R3640
292.1
Memory CD4 T-cell Th17 nTPM: 266.8
Samples: 4
Max nTPM: 368.1
Min nTPM: 176.4
RHH5304_R3670
176.4
RHH5212_R3583
368.1
RHH5240_R3612
194.9
RHH5269_R3641
327.6
Memory CD4 T-cell Th2 nTPM: 285.4
Samples: 4
Max nTPM: 387.1
Min nTPM: 146.8
RHH5305_R3671
283.7
RHH5213_R3584
387.1
RHH5241_R3613
146.8
RHH5270_R3642
323.9
Naive CD4 T-cell nTPM: 268.1
Samples: 4
Max nTPM: 306.5
Min nTPM: 181.6
RHH5306_R3672
287.6
RHH5214_R3585
306.5
RHH5242_R3614
181.6
RHH5271_R3643
296.5
Naive CD8 T-cell nTPM: 213.9
Samples: 4
Max nTPM: 297.9
Min nTPM: 119.1
RHH5201_R3572
119.1
RHH5229_R3601
161.8
RHH5258_R3630
297.9
RHH5287_R3659
276.9
Non-Vd2 gdTCR nTPM: 252.1
Samples: 4
Max nTPM: 316.6
Min nTPM: 132.0
RHH5235_R3607
316.6
RHH5264_R3636
264.7
RHH5207_R3578
132.0
RHH5299_R3665
295.0
T-reg nTPM: 335.1
Samples: 4
Max nTPM: 399.7
Min nTPM: 268.2
RHH5301_R3667
268.2
RHH5237_R3609
399.7
RHH5266_R3638
334.7
RHH5209_R3580
337.8
Terminal effector memory CD4 T-cell nTPM: 300.5
Samples: 2
Max nTPM: 355.4
Min nTPM: 245.5
RHH5243_R3615
355.4
RHH5272_R3644
245.5
Terminal effector memory CD8 T-cell nTPM: 233.4
Samples: 4
Max nTPM: 354.4
Min nTPM: 116.5
RHH5232_R3604
224.3
RHH5204_R3575
238.3
RHH5261_R3633
354.4
RHH5296_R3662
116.5
Vd2 gdTCR nTPM: 285.4
Samples: 4
Max nTPM: 375.9
Min nTPM: 227.8
RHH5234_R3606
289.8
RHH5206_R3577
227.8
RHH5263_R3635
375.9
RHH5298_R3664
248.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
