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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.7
nTPM
Monaco:
268.3
nTPM
Schmiedel:
59.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.7
HPA sample
nTPM
gdT-cell nTPM: 47.0
Samples: 6
Max nTPM: 61.5
Min nTPM: 31.8
P10809_1007
31.8
P10809_1022
61.5
P10809_1041
43.6
P10809_1060
48.9
P10809_1077
48.8
P10809_1098
47.1
MAIT T-cell nTPM: 51.4
Samples: 6
Max nTPM: 66.2
Min nTPM: 37.6
P10809_1006
52.5
P10809_1024
61.9
P10809_1043
45.9
P10809_1062
66.2
P10809_1083
44.4
P10809_1097
37.6
Memory CD4 T-cell nTPM: 58.3
Samples: 6
Max nTPM: 65.7
Min nTPM: 50.3
P10809_1014
50.3
P10809_1026
60.8
P10809_1045
59.6
P10809_1064
59.5
P10809_1086
53.8
P10809_1113
65.7
Memory CD8 T-cell nTPM: 49.5
Samples: 5
Max nTPM: 57.6
Min nTPM: 40.7
P10809_1012
52.1
P10809_1027
42.6
P10809_1046
40.7
P10809_1065
54.3
P10809_1111
57.6
Naive CD4 T-cell nTPM: 59.9
Samples: 6
Max nTPM: 76.6
Min nTPM: 48.1
P10809_1015
49.3
P10809_1030
50.6
P10809_1049
48.1
P10809_1068
69.2
P10809_1085
76.6
P10809_1112
65.6
Naive CD8 T-cell nTPM: 54.6
Samples: 6
Max nTPM: 64.9
Min nTPM: 45.9
P10809_1016
45.9
P10809_1031
53.8
P10809_1050
45.9
P10809_1069
63.4
P10809_1087
53.4
P10809_1110
64.9
T-reg nTPM: 76.7
Samples: 6
Max nTPM: 91.7
Min nTPM: 60.3
P10809_1018
62.6
P10809_1037
85.9
P10809_1056
91.7
P10809_1075
79.9
P10809_1094
79.6
P10809_1106
60.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
268.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 239.0
Samples: 4
Max nTPM: 293.3
Min nTPM: 193.7
RHH5202_R3573
293.3
RHH5230_R3602
235.0
RHH5259_R3631
234.0
RHH5288_R3660
193.7
Effector memory CD8 T-cell nTPM: 267.9
Samples: 4
Max nTPM: 325.7
Min nTPM: 208.9
RHH5203_R3574
315.3
RHH5231_R3603
208.9
RHH5260_R3632
221.6
RHH5289_R3661
325.7
MAIT T-cell nTPM: 228.2
Samples: 4
Max nTPM: 304.2
Min nTPM: 174.8
RHH5233_R3605
252.2
RHH5205_R3576
304.2
RHH5262_R3634
174.8
RHH5297_R3663
181.6
Memory CD4 T-cell TFH nTPM: 238.5
Samples: 4
Max nTPM: 288.1
Min nTPM: 192.2
RHH5300_R3666
238.1
RHH5236_R3608
192.2
RHH5265_R3637
288.1
RHH5208_R3579
235.4
Memory CD4 T-cell Th1 nTPM: 268.4
Samples: 4
Max nTPM: 297.6
Min nTPM: 240.8
RHH5210_R3581
275.7
RHH5302_R3668
240.8
RHH5238_R3610
297.6
RHH5267_R3639
259.3
Memory CD4 T-cell Th1/Th17 nTPM: 259.6
Samples: 4
Max nTPM: 290.4
Min nTPM: 211.3
RHH5303_R3669
255.7
RHH5211_R3582
281.1
RHH5239_R3611
290.4
RHH5268_R3640
211.3
Memory CD4 T-cell Th17 nTPM: 260.5
Samples: 4
Max nTPM: 275.4
Min nTPM: 237.6
RHH5304_R3670
259.2
RHH5212_R3583
269.9
RHH5240_R3612
275.4
RHH5269_R3641
237.6
Memory CD4 T-cell Th2 nTPM: 232.1
Samples: 4
Max nTPM: 255.9
Min nTPM: 215.0
RHH5305_R3671
221.2
RHH5213_R3584
236.2
RHH5241_R3613
255.9
RHH5270_R3642
215.0
Naive CD4 T-cell nTPM: 249.6
Samples: 4
Max nTPM: 262.3
Min nTPM: 236.1
RHH5306_R3672
236.1
RHH5214_R3585
262.3
RHH5242_R3614
240.9
RHH5271_R3643
259.1
Naive CD8 T-cell nTPM: 240.7
Samples: 4
Max nTPM: 276.7
Min nTPM: 198.9
RHH5201_R3572
266.0
RHH5229_R3601
198.9
RHH5258_R3630
221.0
RHH5287_R3659
276.7
Non-Vd2 gdTCR nTPM: 229.0
Samples: 4
Max nTPM: 296.2
Min nTPM: 164.2
RHH5235_R3607
282.7
RHH5264_R3636
164.2
RHH5207_R3578
296.2
RHH5299_R3665
173.0
T-reg nTPM: 217.1
Samples: 4
Max nTPM: 256.8
Min nTPM: 194.8
RHH5301_R3667
206.1
RHH5237_R3609
194.8
RHH5266_R3638
210.5
RHH5209_R3580
256.8
Terminal effector memory CD4 T-cell nTPM: 267.6
Samples: 2
Max nTPM: 272.0
Min nTPM: 263.2
RHH5243_R3615
263.2
RHH5272_R3644
272.0
Terminal effector memory CD8 T-cell nTPM: 243.0
Samples: 4
Max nTPM: 272.8
Min nTPM: 212.5
RHH5232_R3604
244.4
RHH5204_R3575
272.8
RHH5261_R3633
212.5
RHH5296_R3662
242.3
Vd2 gdTCR nTPM: 235.2
Samples: 4
Max nTPM: 264.9
Min nTPM: 179.2
RHH5234_R3606
264.9
RHH5206_R3577
246.1
RHH5263_R3635
250.6
RHH5298_R3664
179.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
