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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
856.5
nTPM
Monaco:
343.7
nTPM
Schmiedel:
330.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
856.5
HPA sample
nTPM
gdT-cell nTPM: 673.3
Samples: 6
Max nTPM: 808.2
Min nTPM: 541.0
P10809_1007
541.0
P10809_1022
702.0
P10809_1041
788.5
P10809_1060
575.3
P10809_1077
808.2
P10809_1098
624.5
MAIT T-cell nTPM: 622.3
Samples: 6
Max nTPM: 850.1
Min nTPM: 366.7
P10809_1006
366.7
P10809_1024
850.1
P10809_1043
641.9
P10809_1062
631.3
P10809_1083
605.2
P10809_1097
638.8
Memory CD4 T-cell nTPM: 763.8
Samples: 6
Max nTPM: 876.6
Min nTPM: 557.8
P10809_1014
557.8
P10809_1026
822.5
P10809_1045
876.6
P10809_1064
765.0
P10809_1086
862.6
P10809_1113
698.3
Memory CD8 T-cell nTPM: 706.9
Samples: 5
Max nTPM: 801.8
Min nTPM: 516.2
P10809_1012
516.2
P10809_1027
801.8
P10809_1046
800.8
P10809_1065
773.8
P10809_1111
642.0
Naive CD4 T-cell nTPM: 737.3
Samples: 6
Max nTPM: 972.0
Min nTPM: 493.1
P10809_1015
493.1
P10809_1030
905.2
P10809_1049
972.0
P10809_1068
668.7
P10809_1085
754.7
P10809_1112
629.8
Naive CD8 T-cell nTPM: 764.3
Samples: 6
Max nTPM: 910.0
Min nTPM: 494.7
P10809_1016
494.7
P10809_1031
910.0
P10809_1050
851.5
P10809_1069
788.4
P10809_1087
893.4
P10809_1110
647.8
T-reg nTPM: 856.5
Samples: 6
Max nTPM: 1052.1
Min nTPM: 558.1
P10809_1018
558.1
P10809_1037
975.5
P10809_1056
1052.1
P10809_1075
785.2
P10809_1094
887.8
P10809_1106
880.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
343.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 228.8
Samples: 4
Max nTPM: 329.0
Min nTPM: 158.2
RHH5202_R3573
198.6
RHH5230_R3602
158.2
RHH5259_R3631
229.2
RHH5288_R3660
329.0
Effector memory CD8 T-cell nTPM: 174.4
Samples: 4
Max nTPM: 208.1
Min nTPM: 135.4
RHH5203_R3574
162.6
RHH5231_R3603
208.1
RHH5260_R3632
191.5
RHH5289_R3661
135.4
MAIT T-cell nTPM: 192.4
Samples: 4
Max nTPM: 278.9
Min nTPM: 139.9
RHH5233_R3605
198.8
RHH5205_R3576
139.9
RHH5262_R3634
152.0
RHH5297_R3663
278.9
Memory CD4 T-cell TFH nTPM: 288.4
Samples: 4
Max nTPM: 445.3
Min nTPM: 206.5
RHH5300_R3666
292.5
RHH5236_R3608
445.3
RHH5265_R3637
209.3
RHH5208_R3579
206.5
Memory CD4 T-cell Th1 nTPM: 264.3
Samples: 4
Max nTPM: 448.6
Min nTPM: 169.5
RHH5210_R3581
169.5
RHH5302_R3668
448.6
RHH5238_R3610
256.8
RHH5267_R3639
182.4
Memory CD4 T-cell Th1/Th17 nTPM: 241.9
Samples: 4
Max nTPM: 337.8
Min nTPM: 155.2
RHH5303_R3669
337.8
RHH5211_R3582
258.7
RHH5239_R3611
155.2
RHH5268_R3640
215.7
Memory CD4 T-cell Th17 nTPM: 182.4
Samples: 4
Max nTPM: 230.0
Min nTPM: 146.5
RHH5304_R3670
184.5
RHH5212_R3583
230.0
RHH5240_R3612
168.4
RHH5269_R3641
146.5
Memory CD4 T-cell Th2 nTPM: 221.3
Samples: 4
Max nTPM: 295.8
Min nTPM: 163.7
RHH5305_R3671
258.3
RHH5213_R3584
163.7
RHH5241_R3613
295.8
RHH5270_R3642
167.3
Naive CD4 T-cell nTPM: 189.4
Samples: 4
Max nTPM: 274.7
Min nTPM: 140.1
RHH5306_R3672
192.3
RHH5214_R3585
274.7
RHH5242_R3614
150.3
RHH5271_R3643
140.1
Naive CD8 T-cell nTPM: 173.0
Samples: 4
Max nTPM: 198.9
Min nTPM: 138.2
RHH5201_R3572
138.2
RHH5229_R3601
180.7
RHH5258_R3630
198.9
RHH5287_R3659
174.1
Non-Vd2 gdTCR nTPM: 271.1
Samples: 4
Max nTPM: 407.4
Min nTPM: 157.3
RHH5235_R3607
157.3
RHH5264_R3636
293.1
RHH5207_R3578
226.4
RHH5299_R3665
407.4
T-reg nTPM: 230.1
Samples: 4
Max nTPM: 322.2
Min nTPM: 143.2
RHH5301_R3667
322.2
RHH5237_R3609
261.3
RHH5266_R3638
143.2
RHH5209_R3580
193.5
Terminal effector memory CD4 T-cell nTPM: 205.1
Samples: 2
Max nTPM: 261.1
Min nTPM: 149.0
RHH5243_R3615
149.0
RHH5272_R3644
261.1
Terminal effector memory CD8 T-cell nTPM: 343.8
Samples: 4
Max nTPM: 560.1
Min nTPM: 238.6
RHH5232_R3604
262.4
RHH5204_R3575
560.1
RHH5261_R3633
238.6
RHH5296_R3662
313.9
Vd2 gdTCR nTPM: 331.7
Samples: 4
Max nTPM: 507.5
Min nTPM: 167.7
RHH5234_R3606
190.8
RHH5206_R3577
507.5
RHH5263_R3635
167.7
RHH5298_R3664
460.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.