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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
86.4
nTPM
Monaco:
32.3
nTPM
Schmiedel:
42.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.4
HPA sample
nTPM
gdT-cell nTPM: 57.0
Samples: 6
Max nTPM: 66.9
Min nTPM: 49.7
P10809_1007
54.0
P10809_1022
66.0
P10809_1041
66.9
P10809_1060
51.8
P10809_1077
49.7
P10809_1098
53.6
MAIT T-cell nTPM: 84.7
Samples: 6
Max nTPM: 116.3
Min nTPM: 60.2
P10809_1006
84.3
P10809_1024
116.3
P10809_1043
75.4
P10809_1062
82.0
P10809_1083
60.2
P10809_1097
89.8
Memory CD4 T-cell nTPM: 77.5
Samples: 6
Max nTPM: 98.9
Min nTPM: 65.3
P10809_1014
76.1
P10809_1026
98.9
P10809_1045
79.0
P10809_1064
65.3
P10809_1086
73.0
P10809_1113
72.9
Memory CD8 T-cell nTPM: 71.7
Samples: 5
Max nTPM: 95.8
Min nTPM: 55.9
P10809_1012
55.9
P10809_1027
95.8
P10809_1046
76.1
P10809_1065
69.9
P10809_1111
61.0
Naive CD4 T-cell nTPM: 82.5
Samples: 6
Max nTPM: 111.6
Min nTPM: 73.0
P10809_1015
73.1
P10809_1030
111.6
P10809_1049
74.7
P10809_1068
75.9
P10809_1085
86.9
P10809_1112
73.0
Naive CD8 T-cell nTPM: 86.4
Samples: 6
Max nTPM: 125.8
Min nTPM: 63.7
P10809_1016
89.3
P10809_1031
125.8
P10809_1050
86.5
P10809_1069
82.2
P10809_1087
63.7
P10809_1110
70.8
T-reg nTPM: 78.3
Samples: 6
Max nTPM: 94.3
Min nTPM: 55.8
P10809_1018
55.8
P10809_1037
88.0
P10809_1056
58.8
P10809_1075
94.3
P10809_1094
94.0
P10809_1106
79.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 20.9
Samples: 4
Max nTPM: 27.7
Min nTPM: 13.9
RHH5202_R3573
17.2
RHH5230_R3602
13.9
RHH5259_R3631
24.9
RHH5288_R3660
27.7
Effector memory CD8 T-cell nTPM: 10.7
Samples: 4
Max nTPM: 13.6
Min nTPM: 8.3
RHH5203_R3574
8.3
RHH5231_R3603
10.6
RHH5260_R3632
13.6
RHH5289_R3661
10.2
MAIT T-cell nTPM: 20.4
Samples: 4
Max nTPM: 21.3
Min nTPM: 19.3
RHH5233_R3605
21.3
RHH5205_R3576
21.2
RHH5262_R3634
19.3
RHH5297_R3663
19.8
Memory CD4 T-cell TFH nTPM: 32.3
Samples: 4
Max nTPM: 60.4
Min nTPM: 18.1
RHH5300_R3666
27.7
RHH5236_R3608
60.4
RHH5265_R3637
18.1
RHH5208_R3579
23.0
Memory CD4 T-cell Th1 nTPM: 23.4
Samples: 4
Max nTPM: 33.4
Min nTPM: 12.3
RHH5210_R3581
12.3
RHH5302_R3668
33.4
RHH5238_R3610
21.2
RHH5267_R3639
26.7
Memory CD4 T-cell Th1/Th17 nTPM: 22.7
Samples: 4
Max nTPM: 25.9
Min nTPM: 19.9
RHH5303_R3669
24.7
RHH5211_R3582
20.1
RHH5239_R3611
19.9
RHH5268_R3640
25.9
Memory CD4 T-cell Th17 nTPM: 21.1
Samples: 4
Max nTPM: 23.4
Min nTPM: 19.5
RHH5304_R3670
23.4
RHH5212_R3583
19.5
RHH5240_R3612
19.7
RHH5269_R3641
21.9
Memory CD4 T-cell Th2 nTPM: 20.4
Samples: 4
Max nTPM: 25.1
Min nTPM: 15.9
RHH5305_R3671
24.7
RHH5213_R3584
25.1
RHH5241_R3613
15.9
RHH5270_R3642
15.9
Naive CD4 T-cell nTPM: 26.4
Samples: 4
Max nTPM: 39.1
Min nTPM: 13.0
RHH5306_R3672
24.5
RHH5214_R3585
39.1
RHH5242_R3614
13.0
RHH5271_R3643
29.0
Naive CD8 T-cell nTPM: 25.0
Samples: 4
Max nTPM: 28.9
Min nTPM: 18.5
RHH5201_R3572
18.5
RHH5229_R3601
28.9
RHH5258_R3630
24.2
RHH5287_R3659
28.2
Non-Vd2 gdTCR nTPM: 14.7
Samples: 4
Max nTPM: 19.1
Min nTPM: 12.7
RHH5235_R3607
12.7
RHH5264_R3636
13.3
RHH5207_R3578
13.7
RHH5299_R3665
19.1
T-reg nTPM: 31.6
Samples: 4
Max nTPM: 36.1
Min nTPM: 22.0
RHH5301_R3667
36.1
RHH5237_R3609
36.0
RHH5266_R3638
22.0
RHH5209_R3580
32.1
Terminal effector memory CD4 T-cell nTPM: 14.0
Samples: 2
Max nTPM: 17.1
Min nTPM: 10.8
RHH5243_R3615
17.1
RHH5272_R3644
10.8
Terminal effector memory CD8 T-cell nTPM: 20.3
Samples: 4
Max nTPM: 40.1
Min nTPM: 12.7
RHH5232_R3604
12.7
RHH5204_R3575
40.1
RHH5261_R3633
13.9
RHH5296_R3662
14.6
Vd2 gdTCR nTPM: 22.2
Samples: 4
Max nTPM: 31.4
Min nTPM: 11.0
RHH5234_R3606
11.0
RHH5206_R3577
30.4
RHH5263_R3635
16.1
RHH5298_R3664
31.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
