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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.9
nTPM
Monaco:
125.2
nTPM
Schmiedel:
58.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.9
HPA sample
nTPM
gdT-cell nTPM: 17.1
Samples: 6
Max nTPM: 35.1
Min nTPM: 8.8
P10809_1007
35.1
P10809_1022
13.1
P10809_1041
10.5
P10809_1060
8.8
P10809_1077
20.7
P10809_1098
14.4
MAIT T-cell nTPM: 20.0
Samples: 6
Max nTPM: 33.2
Min nTPM: 11.1
P10809_1006
33.2
P10809_1024
11.6
P10809_1043
20.9
P10809_1062
11.1
P10809_1083
21.3
P10809_1097
21.8
Memory CD4 T-cell nTPM: 18.6
Samples: 6
Max nTPM: 34.1
Min nTPM: 5.2
P10809_1014
34.1
P10809_1026
13.7
P10809_1045
28.9
P10809_1064
18.5
P10809_1086
11.1
P10809_1113
5.2
Memory CD8 T-cell nTPM: 20.8
Samples: 5
Max nTPM: 35.2
Min nTPM: 3.9
P10809_1012
35.2
P10809_1027
3.9
P10809_1046
26.7
P10809_1065
15.8
P10809_1111
22.3
Naive CD4 T-cell nTPM: 20.9
Samples: 6
Max nTPM: 39.2
Min nTPM: 9.9
P10809_1015
24.5
P10809_1030
9.9
P10809_1049
39.2
P10809_1068
16.6
P10809_1085
24.4
P10809_1112
11.0
Naive CD8 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 27.9
Min nTPM: 8.1
P10809_1016
20.3
P10809_1031
22.4
P10809_1050
27.9
P10809_1069
19.0
P10809_1087
8.1
P10809_1110
14.9
T-reg nTPM: 15.8
Samples: 6
Max nTPM: 45.2
Min nTPM: 6.7
P10809_1018
6.9
P10809_1037
13.9
P10809_1056
45.2
P10809_1075
6.7
P10809_1094
13.7
P10809_1106
8.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 121.0
Samples: 4
Max nTPM: 167.6
Min nTPM: 65.1
RHH5202_R3573
86.7
RHH5230_R3602
167.6
RHH5259_R3631
164.5
RHH5288_R3660
65.1
Effector memory CD8 T-cell nTPM: 101.0
Samples: 4
Max nTPM: 148.6
Min nTPM: 51.7
RHH5203_R3574
75.9
RHH5231_R3603
127.9
RHH5260_R3632
148.6
RHH5289_R3661
51.7
MAIT T-cell nTPM: 88.0
Samples: 4
Max nTPM: 104.9
Min nTPM: 71.7
RHH5233_R3605
82.3
RHH5205_R3576
93.0
RHH5262_R3634
104.9
RHH5297_R3663
71.7
Memory CD4 T-cell TFH nTPM: 95.9
Samples: 4
Max nTPM: 153.4
Min nTPM: 71.1
RHH5300_R3666
81.9
RHH5236_R3608
153.4
RHH5265_R3637
77.0
RHH5208_R3579
71.1
Memory CD4 T-cell Th1 nTPM: 125.3
Samples: 4
Max nTPM: 187.8
Min nTPM: 79.9
RHH5210_R3581
84.9
RHH5302_R3668
79.9
RHH5238_R3610
187.8
RHH5267_R3639
148.4
Memory CD4 T-cell Th1/Th17 nTPM: 97.5
Samples: 4
Max nTPM: 146.4
Min nTPM: 58.0
RHH5303_R3669
58.0
RHH5211_R3582
75.8
RHH5239_R3611
109.7
RHH5268_R3640
146.4
Memory CD4 T-cell Th17 nTPM: 107.9
Samples: 4
Max nTPM: 152.5
Min nTPM: 68.8
RHH5304_R3670
69.9
RHH5212_R3583
152.5
RHH5240_R3612
68.8
RHH5269_R3641
140.3
Memory CD4 T-cell Th2 nTPM: 90.1
Samples: 4
Max nTPM: 138.1
Min nTPM: 57.6
RHH5305_R3671
57.6
RHH5213_R3584
95.3
RHH5241_R3613
69.4
RHH5270_R3642
138.1
Naive CD4 T-cell nTPM: 114.2
Samples: 4
Max nTPM: 145.3
Min nTPM: 66.4
RHH5306_R3672
107.9
RHH5214_R3585
145.3
RHH5242_R3614
66.4
RHH5271_R3643
137.1
Naive CD8 T-cell nTPM: 123.8
Samples: 4
Max nTPM: 210.3
Min nTPM: 85.2
RHH5201_R3572
92.1
RHH5229_R3601
210.3
RHH5258_R3630
85.2
RHH5287_R3659
107.4
Non-Vd2 gdTCR nTPM: 100.0
Samples: 4
Max nTPM: 146.3
Min nTPM: 64.4
RHH5235_R3607
146.3
RHH5264_R3636
64.8
RHH5207_R3578
64.4
RHH5299_R3665
124.3
T-reg nTPM: 100.4
Samples: 4
Max nTPM: 150.4
Min nTPM: 56.7
RHH5301_R3667
56.7
RHH5237_R3609
150.4
RHH5266_R3638
96.3
RHH5209_R3580
98.1
Terminal effector memory CD4 T-cell nTPM: 119.2
Samples: 2
Max nTPM: 172.0
Min nTPM: 66.4
RHH5243_R3615
172.0
RHH5272_R3644
66.4
Terminal effector memory CD8 T-cell nTPM: 87.0
Samples: 4
Max nTPM: 157.0
Min nTPM: 54.4
RHH5232_R3604
54.4
RHH5204_R3575
75.3
RHH5261_R3633
157.0
RHH5296_R3662
61.4
Vd2 gdTCR nTPM: 81.9
Samples: 4
Max nTPM: 93.3
Min nTPM: 60.1
RHH5234_R3606
93.3
RHH5206_R3577
60.1
RHH5263_R3635
86.1
RHH5298_R3664
88.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
