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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
50.5
nTPM
Monaco:
131.3
nTPM
Schmiedel:
45.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
50.5
HPA sample
nTPM
gdT-cell nTPM: 38.7
Samples: 6
Max nTPM: 47.2
Min nTPM: 24.8
P10809_1007
24.8
P10809_1022
47.2
P10809_1041
42.6
P10809_1060
35.6
P10809_1077
40.4
P10809_1098
41.7
MAIT T-cell nTPM: 44.7
Samples: 6
Max nTPM: 76.3
Min nTPM: 29.5
P10809_1006
29.5
P10809_1024
76.3
P10809_1043
39.0
P10809_1062
39.2
P10809_1083
41.2
P10809_1097
42.7
Memory CD4 T-cell nTPM: 35.3
Samples: 6
Max nTPM: 45.7
Min nTPM: 27.2
P10809_1014
27.2
P10809_1026
32.6
P10809_1045
45.7
P10809_1064
34.5
P10809_1086
36.0
P10809_1113
35.6
Memory CD8 T-cell nTPM: 41.1
Samples: 5
Max nTPM: 46.3
Min nTPM: 32.6
P10809_1012
38.7
P10809_1027
43.8
P10809_1046
46.3
P10809_1065
44.2
P10809_1111
32.6
Naive CD4 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 68.0
Min nTPM: 25.8
P10809_1015
25.8
P10809_1030
41.3
P10809_1049
68.0
P10809_1068
45.7
P10809_1085
32.7
P10809_1112
33.8
Naive CD8 T-cell nTPM: 40.7
Samples: 6
Max nTPM: 48.7
Min nTPM: 28.0
P10809_1016
28.0
P10809_1031
45.7
P10809_1050
44.8
P10809_1069
48.7
P10809_1087
46.9
P10809_1110
30.1
T-reg nTPM: 50.5
Samples: 6
Max nTPM: 80.0
Min nTPM: 35.3
P10809_1018
35.3
P10809_1037
51.3
P10809_1056
80.0
P10809_1075
47.4
P10809_1094
35.7
P10809_1106
53.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.4
Samples: 4
Max nTPM: 139.0
Min nTPM: 116.1
RHH5202_R3573
129.0
RHH5230_R3602
116.1
RHH5259_R3631
139.0
RHH5288_R3660
121.5
Effector memory CD8 T-cell nTPM: 113.9
Samples: 4
Max nTPM: 137.3
Min nTPM: 89.0
RHH5203_R3574
112.9
RHH5231_R3603
89.0
RHH5260_R3632
116.4
RHH5289_R3661
137.3
MAIT T-cell nTPM: 125.5
Samples: 4
Max nTPM: 134.1
Min nTPM: 109.9
RHH5233_R3605
134.1
RHH5205_R3576
129.3
RHH5262_R3634
128.6
RHH5297_R3663
109.9
Memory CD4 T-cell TFH nTPM: 111.7
Samples: 4
Max nTPM: 123.2
Min nTPM: 90.6
RHH5300_R3666
90.6
RHH5236_R3608
123.2
RHH5265_R3637
117.2
RHH5208_R3579
115.6
Memory CD4 T-cell Th1 nTPM: 100.4
Samples: 4
Max nTPM: 112.5
Min nTPM: 86.8
RHH5210_R3581
101.1
RHH5302_R3668
86.8
RHH5238_R3610
112.5
RHH5267_R3639
101.0
Memory CD4 T-cell Th1/Th17 nTPM: 105.5
Samples: 4
Max nTPM: 118.4
Min nTPM: 82.0
RHH5303_R3669
107.1
RHH5211_R3582
114.4
RHH5239_R3611
118.4
RHH5268_R3640
82.0
Memory CD4 T-cell Th17 nTPM: 98.7
Samples: 4
Max nTPM: 109.4
Min nTPM: 84.1
RHH5304_R3670
106.6
RHH5212_R3583
84.1
RHH5240_R3612
94.8
RHH5269_R3641
109.4
Memory CD4 T-cell Th2 nTPM: 108.5
Samples: 4
Max nTPM: 127.6
Min nTPM: 80.7
RHH5305_R3671
80.7
RHH5213_R3584
111.4
RHH5241_R3613
127.6
RHH5270_R3642
114.4
Naive CD4 T-cell nTPM: 94.9
Samples: 4
Max nTPM: 110.7
Min nTPM: 85.0
RHH5306_R3672
85.0
RHH5214_R3585
89.1
RHH5242_R3614
110.7
RHH5271_R3643
94.9
Naive CD8 T-cell nTPM: 105.1
Samples: 4
Max nTPM: 134.2
Min nTPM: 93.2
RHH5201_R3572
96.8
RHH5229_R3601
134.2
RHH5258_R3630
96.2
RHH5287_R3659
93.2
Non-Vd2 gdTCR nTPM: 121.6
Samples: 4
Max nTPM: 139.6
Min nTPM: 98.9
RHH5235_R3607
139.6
RHH5264_R3636
98.9
RHH5207_R3578
135.1
RHH5299_R3665
112.8
T-reg nTPM: 93.7
Samples: 4
Max nTPM: 115.2
Min nTPM: 68.0
RHH5301_R3667
68.0
RHH5237_R3609
103.3
RHH5266_R3638
115.2
RHH5209_R3580
88.3
Terminal effector memory CD4 T-cell nTPM: 123.6
Samples: 2
Max nTPM: 126.1
Min nTPM: 121.0
RHH5243_R3615
121.0
RHH5272_R3644
126.1
Terminal effector memory CD8 T-cell nTPM: 131.4
Samples: 4
Max nTPM: 155.6
Min nTPM: 99.0
RHH5232_R3604
155.6
RHH5204_R3575
130.3
RHH5261_R3633
99.0
RHH5296_R3662
140.5
Vd2 gdTCR nTPM: 109.9
Samples: 4
Max nTPM: 119.5
Min nTPM: 105.5
RHH5234_R3606
105.5
RHH5206_R3577
106.1
RHH5263_R3635
119.5
RHH5298_R3664
108.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
