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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
182.4
nTPM
Monaco:
150.7
nTPM
Schmiedel:
54.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
182.4
HPA sample
nTPM
gdT-cell nTPM: 82.7
Samples: 6
Max nTPM: 95.3
Min nTPM: 52.3
P10809_1007
52.3
P10809_1022
81.6
P10809_1041
86.1
P10809_1060
93.2
P10809_1077
87.4
P10809_1098
95.3
MAIT T-cell nTPM: 100.3
Samples: 6
Max nTPM: 127.1
Min nTPM: 63.0
P10809_1006
63.0
P10809_1024
127.1
P10809_1043
75.3
P10809_1062
95.7
P10809_1083
119.8
P10809_1097
121.1
Memory CD4 T-cell nTPM: 111.5
Samples: 6
Max nTPM: 141.9
Min nTPM: 84.0
P10809_1014
84.0
P10809_1026
101.9
P10809_1045
94.1
P10809_1064
119.5
P10809_1086
141.9
P10809_1113
127.8
Memory CD8 T-cell nTPM: 100.2
Samples: 5
Max nTPM: 129.7
Min nTPM: 67.5
P10809_1012
67.5
P10809_1027
108.9
P10809_1046
82.4
P10809_1065
112.6
P10809_1111
129.7
Naive CD4 T-cell nTPM: 92.3
Samples: 6
Max nTPM: 108.7
Min nTPM: 71.9
P10809_1015
71.9
P10809_1030
89.8
P10809_1049
91.0
P10809_1068
93.0
P10809_1085
108.7
P10809_1112
99.6
Naive CD8 T-cell nTPM: 95.7
Samples: 6
Max nTPM: 124.2
Min nTPM: 55.0
P10809_1016
55.0
P10809_1031
107.7
P10809_1050
81.6
P10809_1069
111.0
P10809_1087
124.2
P10809_1110
94.4
T-reg nTPM: 182.4
Samples: 6
Max nTPM: 223.1
Min nTPM: 118.1
P10809_1018
118.1
P10809_1037
223.1
P10809_1056
183.7
P10809_1075
201.6
P10809_1094
193.1
P10809_1106
174.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 116.1
Samples: 4
Max nTPM: 155.4
Min nTPM: 85.4
RHH5202_R3573
155.4
RHH5230_R3602
85.4
RHH5259_R3631
90.1
RHH5288_R3660
133.4
Effector memory CD8 T-cell nTPM: 150.7
Samples: 4
Max nTPM: 192.7
Min nTPM: 95.4
RHH5203_R3574
192.7
RHH5231_R3603
149.4
RHH5260_R3632
95.4
RHH5289_R3661
165.2
MAIT T-cell nTPM: 134.4
Samples: 4
Max nTPM: 159.9
Min nTPM: 101.7
RHH5233_R3605
159.9
RHH5205_R3576
101.7
RHH5262_R3634
143.2
RHH5297_R3663
132.7
Memory CD4 T-cell TFH nTPM: 141.0
Samples: 4
Max nTPM: 188.0
Min nTPM: 108.9
RHH5300_R3666
108.9
RHH5236_R3608
188.0
RHH5265_R3637
135.8
RHH5208_R3579
131.4
Memory CD4 T-cell Th1 nTPM: 102.5
Samples: 4
Max nTPM: 119.7
Min nTPM: 78.4
RHH5210_R3581
119.7
RHH5302_R3668
116.0
RHH5238_R3610
78.4
RHH5267_R3639
96.0
Memory CD4 T-cell Th1/Th17 nTPM: 109.2
Samples: 4
Max nTPM: 154.3
Min nTPM: 55.2
RHH5303_R3669
154.3
RHH5211_R3582
148.2
RHH5239_R3611
55.2
RHH5268_R3640
79.2
Memory CD4 T-cell Th17 nTPM: 108.3
Samples: 4
Max nTPM: 131.4
Min nTPM: 80.9
RHH5304_R3670
121.4
RHH5212_R3583
131.4
RHH5240_R3612
80.9
RHH5269_R3641
99.3
Memory CD4 T-cell Th2 nTPM: 138.3
Samples: 4
Max nTPM: 151.1
Min nTPM: 121.0
RHH5305_R3671
121.0
RHH5213_R3584
151.1
RHH5241_R3613
135.7
RHH5270_R3642
145.4
Naive CD4 T-cell nTPM: 96.2
Samples: 4
Max nTPM: 103.8
Min nTPM: 90.7
RHH5306_R3672
98.5
RHH5214_R3585
103.8
RHH5242_R3614
91.8
RHH5271_R3643
90.7
Naive CD8 T-cell nTPM: 95.6
Samples: 4
Max nTPM: 130.1
Min nTPM: 43.7
RHH5201_R3572
130.1
RHH5229_R3601
43.7
RHH5258_R3630
118.0
RHH5287_R3659
90.7
Non-Vd2 gdTCR nTPM: 111.4
Samples: 4
Max nTPM: 155.5
Min nTPM: 57.6
RHH5235_R3607
57.6
RHH5264_R3636
155.5
RHH5207_R3578
136.3
RHH5299_R3665
96.1
T-reg nTPM: 125.9
Samples: 4
Max nTPM: 177.6
Min nTPM: 88.3
RHH5301_R3667
118.7
RHH5237_R3609
177.6
RHH5266_R3638
88.3
RHH5209_R3580
119.1
Terminal effector memory CD4 T-cell nTPM: 115.0
Samples: 2
Max nTPM: 134.8
Min nTPM: 95.1
RHH5243_R3615
95.1
RHH5272_R3644
134.8
Terminal effector memory CD8 T-cell nTPM: 121.9
Samples: 4
Max nTPM: 147.8
Min nTPM: 108.3
RHH5232_R3604
123.0
RHH5204_R3575
147.8
RHH5261_R3633
108.3
RHH5296_R3662
108.6
Vd2 gdTCR nTPM: 121.2
Samples: 4
Max nTPM: 164.6
Min nTPM: 97.2
RHH5234_R3606
114.8
RHH5206_R3577
164.6
RHH5263_R3635
108.2
RHH5298_R3664
97.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
