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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.9
nTPM
Monaco:
128.8
nTPM
Schmiedel:
100.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.9
HPA sample
nTPM
gdT-cell nTPM: 48.3
Samples: 6
Max nTPM: 65.3
Min nTPM: 30.8
P10809_1007
30.8
P10809_1022
65.3
P10809_1041
59.3
P10809_1060
50.9
P10809_1077
39.0
P10809_1098
44.3
MAIT T-cell nTPM: 53.8
Samples: 6
Max nTPM: 87.3
Min nTPM: 36.2
P10809_1006
36.4
P10809_1024
87.3
P10809_1043
51.3
P10809_1062
59.4
P10809_1083
36.2
P10809_1097
52.1
Memory CD4 T-cell nTPM: 50.4
Samples: 6
Max nTPM: 59.9
Min nTPM: 36.3
P10809_1014
36.3
P10809_1026
59.9
P10809_1045
55.2
P10809_1064
50.8
P10809_1086
49.5
P10809_1113
50.7
Memory CD8 T-cell nTPM: 49.0
Samples: 5
Max nTPM: 69.0
Min nTPM: 34.5
P10809_1012
34.5
P10809_1027
40.3
P10809_1046
69.0
P10809_1065
52.3
P10809_1111
48.8
Naive CD4 T-cell nTPM: 48.0
Samples: 6
Max nTPM: 62.3
Min nTPM: 28.7
P10809_1015
28.7
P10809_1030
50.6
P10809_1049
62.3
P10809_1068
54.8
P10809_1085
43.2
P10809_1112
48.1
Naive CD8 T-cell nTPM: 42.4
Samples: 6
Max nTPM: 53.5
Min nTPM: 27.3
P10809_1016
27.3
P10809_1031
53.5
P10809_1050
44.3
P10809_1069
46.3
P10809_1087
42.6
P10809_1110
40.3
T-reg nTPM: 59.9
Samples: 6
Max nTPM: 84.8
Min nTPM: 43.3
P10809_1018
44.3
P10809_1037
43.3
P10809_1056
84.8
P10809_1075
62.3
P10809_1094
59.8
P10809_1106
65.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 104.3
Samples: 4
Max nTPM: 132.5
Min nTPM: 86.5
RHH5202_R3573
132.5
RHH5230_R3602
86.5
RHH5259_R3631
102.3
RHH5288_R3660
95.7
Effector memory CD8 T-cell nTPM: 123.0
Samples: 4
Max nTPM: 134.6
Min nTPM: 112.1
RHH5203_R3574
112.1
RHH5231_R3603
134.6
RHH5260_R3632
127.1
RHH5289_R3661
118.1
MAIT T-cell nTPM: 118.4
Samples: 4
Max nTPM: 127.4
Min nTPM: 99.6
RHH5233_R3605
127.4
RHH5205_R3576
126.0
RHH5262_R3634
120.7
RHH5297_R3663
99.6
Memory CD4 T-cell TFH nTPM: 110.1
Samples: 4
Max nTPM: 132.4
Min nTPM: 100.3
RHH5300_R3666
103.4
RHH5236_R3608
132.4
RHH5265_R3637
100.3
RHH5208_R3579
104.3
Memory CD4 T-cell Th1 nTPM: 106.4
Samples: 4
Max nTPM: 119.5
Min nTPM: 99.7
RHH5210_R3581
99.7
RHH5302_R3668
103.5
RHH5238_R3610
119.5
RHH5267_R3639
102.7
Memory CD4 T-cell Th1/Th17 nTPM: 119.9
Samples: 4
Max nTPM: 129.6
Min nTPM: 99.6
RHH5303_R3669
122.8
RHH5211_R3582
129.6
RHH5239_R3611
127.4
RHH5268_R3640
99.6
Memory CD4 T-cell Th17 nTPM: 128.8
Samples: 4
Max nTPM: 165.0
Min nTPM: 101.4
RHH5304_R3670
127.5
RHH5212_R3583
121.4
RHH5240_R3612
165.0
RHH5269_R3641
101.4
Memory CD4 T-cell Th2 nTPM: 123.1
Samples: 4
Max nTPM: 140.7
Min nTPM: 106.8
RHH5305_R3671
131.9
RHH5213_R3584
140.7
RHH5241_R3613
106.8
RHH5270_R3642
113.0
Naive CD4 T-cell nTPM: 102.4
Samples: 4
Max nTPM: 117.3
Min nTPM: 89.5
RHH5306_R3672
102.3
RHH5214_R3585
117.3
RHH5242_R3614
89.5
RHH5271_R3643
100.4
Naive CD8 T-cell nTPM: 107.3
Samples: 4
Max nTPM: 116.0
Min nTPM: 92.0
RHH5201_R3572
109.4
RHH5229_R3601
111.9
RHH5258_R3630
92.0
RHH5287_R3659
116.0
Non-Vd2 gdTCR nTPM: 114.7
Samples: 4
Max nTPM: 121.4
Min nTPM: 109.5
RHH5235_R3607
109.6
RHH5264_R3636
118.1
RHH5207_R3578
121.4
RHH5299_R3665
109.5
T-reg nTPM: 107.0
Samples: 4
Max nTPM: 131.5
Min nTPM: 86.2
RHH5301_R3667
86.2
RHH5237_R3609
131.5
RHH5266_R3638
102.0
RHH5209_R3580
108.4
Terminal effector memory CD4 T-cell nTPM: 102.1
Samples: 2
Max nTPM: 112.8
Min nTPM: 91.3
RHH5243_R3615
112.8
RHH5272_R3644
91.3
Terminal effector memory CD8 T-cell nTPM: 109.2
Samples: 4
Max nTPM: 124.6
Min nTPM: 90.0
RHH5232_R3604
115.3
RHH5204_R3575
90.0
RHH5261_R3633
124.6
RHH5296_R3662
106.7
Vd2 gdTCR nTPM: 118.3
Samples: 4
Max nTPM: 131.1
Min nTPM: 103.6
RHH5234_R3606
131.1
RHH5206_R3577
113.3
RHH5263_R3635
125.0
RHH5298_R3664
103.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
