HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:105.5 nTPM
HPA Brain:147.8 nTPM
GTEx:105.5 nTPM
FANTOM5:286.7 Scaled Tags Per Million
Pig:129.0 nTPM
Mouse:146.5 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007704
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 147.8
Sample id Sample description nTPM
Hippocampus
nTPM: 146.9
2529 Female, age 94, left hemisphere 178.4
1898 Male, age 80, left hemisphere 158.7
2621 Female, age 67, right hemisphere 149.9
1911 Female, age 85, right hemisphere 134.8
1855 Male, age 76, left hemisphere 134.2
2148 Female, age 91, left hemisphere 125.7
Dentate gyrus
nTPM: 135.3
2530 Female, age 94, left hemisphere 176.7
2528 Male, age 74, both hemispheres 147.0
2010 Male, age 76, both hemispheres 146.5
2246 Female, age 85, both hemispheres 134.8
2531 Female, age 67, both hemispheres 115.7
1927 Female, age 91, both hemispheres 91.3
Entorhinal gyrus
nTPM: 140.4
2117 Female, age 91, right hemisphere 183.3
1787 Male, age 76, left hemisphere 140.1
2764 Male, age 80, right hemisphere 133.4
1938 Female, age 85, left hemisphere 130.6
2613 Female, age 94, left hemisphere 127.6
2686 Male, age 75, right hemisphere 127.4
Hippocampus, CA1
nTPM: 116.0
2527 Male, age 74, both hemispheres 135.8
1873 Female, age 85, both hemispheres 132.1
2082 Female, age 91, right hemisphere 128.1
2045 Male, age 76, both hemispheres 102.4
2749 Male, age 80, left hemisphere 81.8
Hippocampus, CA2
nTPM: 135.6
1940 Female, age 85, left hemisphere 156.8
2437 Female, age 94, left hemisphere 152.7
2249 Male, age 74, both hemispheres 131.8
1963 Male, age 80, left hemisphere 130.7
2113 Female, age 91, right hemisphere 130.2
1892 Male, age 76, both hemispheres 111.1
Hippocampus, CA3
nTPM: 117.6
2861 Female, age 67, both hemispheres 151.3
1891 Female, age 85, both hemispheres 136.4
1867 Male, age 76, both hemispheres 125.8
2436 Male, age 74, both hemispheres 104.9
2620 Female, age 94, left hemisphere 100.2
2137 Male, age 80, left hemisphere 86.8
Parahippocampal cortex
nTPM: 127.2
2018 Male, age 76, both hemispheres 151.6
2692 Male, age 74, both hemispheres 138.7
2245 Female, age 91, both hemispheres 133.3
2250 Female, age 67, right hemisphere 132.0
2532 Female, age 72, left hemisphere 131.1
2622 Female, age 67, right hemisphere 123.6
1933 Female, age 85, both hemispheres 121.6
1850 Male, age 80, both hemispheres 121.1
1990 Female, age 91, right hemisphere 117.2
2693 Female, age 94, both hemispheres 102.0
Perirhinal gyrus
nTPM: 121.2
1794 Male, age 80, right hemisphere 134.9
2521 Female, age 94, right hemisphere 123.4
1841 Female, age 85, right hemisphere 119.9
1847 Female, age 91, left hemisphere 116.3
2848 Male, age 76, right hemisphere 111.7
Subiculum
nTPM: 147.8
2042 Male, age 76, both hemispheres 182.7
2619 Male, age 74, both hemispheres 153.3
2729 Female, age 91, right hemisphere 147.1
2438 Female, age 94, left hemisphere 146.5
1901 Male, age 80, both hemispheres 128.8
1977 Female, age 85, both hemispheres 128.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 105.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.5
Samples: 197

Max nTPM: 208.3
Min nTPM: 42.7
Std nTPM: 27.3
Median nTPM: 101.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 208.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 171.0
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 170.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 168.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 168.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 167.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 165.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 164.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 164.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 161.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 161.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 286.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 286.7
FF:10153-102I9 76 years, female 336.6
FF:10169-103B7 60 years, female 236.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 129.0
Pig sample Sample description nTPM
Subiculum
nTPM: 129.0
Samples: 4

Max nTPM: 157.0
Min nTPM: 117.6
Sample A Female 157.0
Sample B Female 122.9
Sample C Male 117.6
Sample D Male 118.6
Dorsal hippocampus
nTPM: 108.9
Samples: 4

Max nTPM: 137.0
Min nTPM: 66.4
Sample A Female 131.1
Sample B Female 101.0
Sample C Male 137.0
Sample D Male 66.4
Entorhinal cortex
nTPM: 107.0
Samples: 4

Max nTPM: 124.4
Min nTPM: 89.9
Sample A Female 124.4
Sample B Female 93.4
Sample C Male 120.3
Sample D Male 89.9
Ventral hippocampus
nTPM: 121.2
Samples: 4

Max nTPM: 156.4
Min nTPM: 94.9
Sample A Female 125.1
Sample B Female 94.9
Sample C Male 156.4
Sample D Male 108.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 146.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 146.5
Samples: 4

Max nTPM: 155.7
Min nTPM: 131.2
Sample A Male 155.4
Sample B Male 131.2
Sample C Female 155.7
Sample D Female 143.6
Hippocampal formation
nTPM: 137.6
Samples: 4

Max nTPM: 146.6
Min nTPM: 126.5
Sample A Male 146.6
Sample B Male 130.6
Sample C Female 126.5
Sample D Female 146.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
2263 Antisense, RP_Baylor_102821, Mouse strain C57BL/6J (56 days, male) 0.9

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