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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
208.0
nTPM
FANTOM5:
366.9
Scaled Tags Per Million
Pig:
184.1
nTPM
Allen mouse:
0.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
208.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 184.4
2301
Female, age 85, both hemispheres
218.3
2090
Male, age 80, both hemispheres
209.5
2188
Female, age 91, both hemispheres
174.3
1984
Male, age 76, both hemispheres
135.3
Dorsal cochlear nucleus nTPM: 186.9
2378
Male, age 80, both hemispheres
203.0
2187
Female, age 91, both hemispheres
197.4
2802
Male, age 74, right hemisphere
187.6
2370
Male, age 61, both hemispheres
181.0
2058
Male, age 76, both hemispheres
165.4
Dorsal tegmental nucleus nTPM: 208.0
2358
Male, age 61, both hemispheres
314.7
2083
Male, age 80, both hemispheres
178.9
2326
Male, age 74, both hemispheres
177.2
1936
Male, age 76, left hemisphere
161.2
Dorsolateral tegmental area nTPM: 206.7
2337
Male, age 61, both hemispheres
362.8
2751
Female, age 85, both hemispheres
187.9
2654
Male, age 80, both hemispheres
181.2
2360
Male, age 74, both hemispheres
153.4
2141
Male, age 76, both hemispheres
148.5
Kolliker-Fuse nucleus nTPM: 206.7
2315
Male, age 76, right hemisphere
267.2
2793
Female, age 91, left hemisphere
190.2
2163
Male, age 80, both hemispheres
162.8
Lateral lemniscal nuclei nTPM: 143.5
2320
Female, age 91, left hemisphere
155.5
2746
Female, age 85, left hemisphere
147.7
2169
Male, age 76, both hemispheres
143.2
2453
Male, age 74, right hemisphere
137.4
2036
Male, age 80, both hemispheres
133.8
Lateral parabrachial nucleus nTPM: 203.2
2792
Male, age 76, both hemispheres
272.7
2013
Male, age 80, both hemispheres
196.1
2790
Male, age 61, both hemispheres
183.8
2139
Female, age 85, right hemisphere
160.3
Lateral vestibular nucleus nTPM: 196.2
2311
Male, age 80, both hemispheres
232.1
2184
Male, age 76, both hemispheres
160.3
Locus coeruleus nTPM: 170.8
2720
Male, age 74, both hemispheres
189.0
2317
Female, age 72, unknown
181.9
2014
Male, age 55, unknown
181.1
2162
Male, age 80, both hemispheres
173.2
1980
Male, age 76, both hemispheres
167.6
2123
Female, age 91, both hemispheres
165.4
2788
Male, age 74, unknown
137.4
Medial parabrachial nucleus nTPM: 184.7
2170
Female, age 91, both hemispheres
223.0
2854
Male, age 80, both hemispheres
185.7
2786
Male, age 76, both hemispheres
180.1
2156
Male, age 61, both hemispheres
176.8
2463
Female, age 85, right hemisphere
157.9
Medial periolivary nuclei nTPM: 148.5
2081
Male, age 80, both hemispheres
180.0
2791
Male, age 74, right hemisphere
154.5
2458
Female, age 91, both hemispheres
150.2
2063
Male, age 76, both hemispheres
145.9
2171
Female, age 85, both hemispheres
111.7
Motor facial nucleus nTPM: 154.3
2795
Female, age 91, both hemispheres
172.0
2126
Male, age 61, both hemispheres
166.0
2697
Female, age 85, both hemispheres
164.4
2365
Male, age 74, right hemisphere
159.5
2062
Male, age 76, both hemispheres
132.1
2327
Male, age 80, both hemispheres
131.7
Motor trigeminal nucleus nTPM: 166.4
2335
Male, age 61, both hemispheres
207.0
2309
Male, age 76, both hemispheres
169.1
2321
Female, age 91, both hemispheres
163.9
2560
Male, age 74, both hemispheres
154.6
2079
Male, age 80, both hemispheres
137.4
Nuclei of the trapezoid body nTPM: 127.0
2166
Male, age 80, both hemispheres
144.5
2368
Female, age 91, both hemispheres
136.4
1983
Male, age 76, both hemispheres
136.0
2159
Male, age 61, both hemispheres
114.8
2735
Female, age 85, both hemispheres
103.3
Nucleus raphe magnus nTPM: 135.2
2051
Male, age 76, both hemispheres
182.1
2328
Male, age 80, both hemispheres
153.1
2455
Male, age 74, both hemispheres
136.3
2459
Female, age 91, both hemispheres
135.5
2160
Male, age 61, both hemispheres
104.2
2172
Female, age 85, both hemispheres
100.1
Paramedian reticular nucleus nTPM: 164.6
2052
Male, age 76, both hemispheres
175.9
2313
Male, age 61, both hemispheres
170.3
2057
Male, age 80, both hemispheres
166.5
2050
Female, age 85, both hemispheres
145.6
Pedunculopontine tegmental nucleus nTPM: 205.0
2338
Male, age 61, both hemispheres
282.0
2334
Male, age 80, both hemispheres
189.5
1921
Female, age 85, both hemispheres
143.6
Pontine nuclei nTPM: 143.2
2319
Female, age 91, both hemispheres
177.9
2115
Male, age 80, left hemisphere
177.1
2109
Female, age 72, unknown
147.6
2454
Male, age 74, left hemisphere
142.5
1968
Male, age 76, left hemisphere
142.3
1863
Male, age 55, unknown
133.2
2787
Female, age 85, both hemispheres
123.4
2727
Male, age 61, right hemisphere
101.4
Pontine raphe nucleus nTPM: 140.2
2853
Male, age 76, midline
156.8
2122
Female, age 85, midline
123.6
Posteroventral cochlear nucleus nTPM: 181.5
2341
Male, age 80, both hemispheres
215.1
2371
Male, age 61, both hemispheres
194.8
2135
Female, age 91, both hemispheres
191.2
2070
Male, age 76, both hemispheres
179.1
2752
Female, age 85, both hemispheres
127.4
Principal sensory trigeminal nucleus nTPM: 144.2
2324
Male, age 76, both hemispheres
176.8
2367
Female, age 91, left hemisphere
163.1
2158
Male, age 61, both hemispheres
120.7
2008
Male, age 80, left hemisphere
116.2
Reticular pontine nucleus, caudal nTPM: 150.8
2092
Male, age 76, both hemispheres
180.0
2559
Male, age 74, both hemispheres
158.6
2457
Female, age 91, both hemispheres
143.2
2332
Male, age 80, right hemisphere
121.4
Reticular pontine nucleus, oral nTPM: 157.2
2167
Male, age 76, both hemispheres
181.6
1939
Male, age 80, both hemispheres
171.7
2366
Female, age 91, both hemispheres
165.5
2012
Female, age 85, both hemispheres
138.5
2361
Male, age 74, both hemispheres
128.6
Reticulotegmental nucleus nTPM: 169.1
2333
Male, age 80, both hemispheres
183.9
2322
Female, age 91, both hemispheres
176.9
2452
Male, age 74, both hemispheres
170.5
2325
Male, age 76, both hemispheres
145.1
Spinal trigeminal nucleus, oral nTPM: 153.9
2164
Male, age 80, both hemispheres
182.3
1978
Male, age 76, both hemispheres
155.7
2737
Female, age 85, both hemispheres
123.6
Subcoeruleus area nTPM: 164.3
2369
Female, age 85, left hemisphere
195.3
2451
Male, age 74, both hemispheres
167.6
2323
Female, age 91, left hemisphere
162.6
1958
Male, age 80, both hemispheres
148.7
2089
Male, age 76, left hemisphere
147.4
Superior olive nTPM: 149.6
2020
Male, age 76, both hemispheres
174.8
2364
Male, age 74, right hemisphere
158.6
2561
Female, age 91, both hemispheres
157.0
2329
Male, age 80, right hemisphere
148.6
1875
Female, age 85, both hemispheres
108.9
Ventral periolivary nuclei nTPM: 147.1
2023
Male, age 76, both hemispheres
185.4
2794
Female, age 91, left hemisphere
142.9
2165
Male, age 80, both hemispheres
140.0
2130
Female, age 85, both hemispheres
120.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 174.7
2359
Male, age 61, both hemispheres
232.3
2161
Male, age 80, both hemispheres
179.7
2840
Female, age 85, both hemispheres
170.1
1959
Male, age 76, both hemispheres
167.6
2456
Female, age 91, both hemispheres
157.3
2449
Male, age 74, both hemispheres
141.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
184.1
Pig sample
Sample description
nTPM
Pons nTPM: 184.1
Samples: 4
Max nTPM: 201.1
Min nTPM: 162.0
Sample A
Female
180.3
Sample B
Female
162.0
Sample C
Male
201.1
Sample D
Male
192.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
