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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.3
nTPM
Monaco:
125.0
nTPM
Schmiedel:
258.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.3
HPA sample
nTPM
gdT-cell nTPM: 33.8
Samples: 6
Max nTPM: 55.5
Min nTPM: 23.5
P10809_1007
26.8
P10809_1022
31.3
P10809_1041
55.5
P10809_1060
30.8
P10809_1077
34.6
P10809_1098
23.5
MAIT T-cell nTPM: 20.2
Samples: 6
Max nTPM: 28.8
Min nTPM: 13.6
P10809_1006
13.6
P10809_1024
22.4
P10809_1043
28.8
P10809_1062
23.2
P10809_1083
19.1
P10809_1097
14.3
Memory CD4 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 41.6
Min nTPM: 17.0
P10809_1014
17.0
P10809_1026
41.6
P10809_1045
26.8
P10809_1064
34.2
P10809_1086
22.4
P10809_1113
19.2
Memory CD8 T-cell nTPM: 34.3
Samples: 5
Max nTPM: 48.3
Min nTPM: 18.4
P10809_1012
18.4
P10809_1027
48.3
P10809_1046
33.0
P10809_1065
39.1
P10809_1111
32.9
Naive CD4 T-cell nTPM: 20.3
Samples: 6
Max nTPM: 33.6
Min nTPM: 7.7
P10809_1015
7.7
P10809_1030
28.0
P10809_1049
19.4
P10809_1068
14.2
P10809_1085
33.6
P10809_1112
18.7
Naive CD8 T-cell nTPM: 25.9
Samples: 6
Max nTPM: 41.5
Min nTPM: 12.2
P10809_1016
12.2
P10809_1031
32.8
P10809_1050
23.8
P10809_1069
41.5
P10809_1087
22.7
P10809_1110
22.3
T-reg nTPM: 34.1
Samples: 6
Max nTPM: 40.8
Min nTPM: 25.5
P10809_1018
25.5
P10809_1037
35.5
P10809_1056
40.7
P10809_1075
33.6
P10809_1094
28.6
P10809_1106
40.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.8
Samples: 4
Max nTPM: 112.8
Min nTPM: 19.8
RHH5202_R3573
19.8
RHH5230_R3602
112.8
RHH5259_R3631
62.8
RHH5288_R3660
67.7
Effector memory CD8 T-cell nTPM: 111.1
Samples: 4
Max nTPM: 152.3
Min nTPM: 73.9
RHH5203_R3574
152.3
RHH5231_R3603
121.8
RHH5260_R3632
96.2
RHH5289_R3661
73.9
MAIT T-cell nTPM: 92.8
Samples: 4
Max nTPM: 132.1
Min nTPM: 60.1
RHH5233_R3605
60.1
RHH5205_R3576
81.0
RHH5262_R3634
132.1
RHH5297_R3663
97.9
Memory CD4 T-cell TFH nTPM: 67.1
Samples: 4
Max nTPM: 94.6
Min nTPM: 27.0
RHH5300_R3666
88.2
RHH5236_R3608
58.4
RHH5265_R3637
94.6
RHH5208_R3579
27.0
Memory CD4 T-cell Th1 nTPM: 89.6
Samples: 4
Max nTPM: 110.3
Min nTPM: 70.7
RHH5210_R3581
70.7
RHH5302_R3668
110.3
RHH5238_R3610
86.5
RHH5267_R3639
90.8
Memory CD4 T-cell Th1/Th17 nTPM: 72.0
Samples: 4
Max nTPM: 88.9
Min nTPM: 48.1
RHH5303_R3669
48.1
RHH5211_R3582
75.8
RHH5239_R3611
75.1
RHH5268_R3640
88.9
Memory CD4 T-cell Th17 nTPM: 68.5
Samples: 4
Max nTPM: 91.9
Min nTPM: 31.1
RHH5304_R3670
73.7
RHH5212_R3583
77.1
RHH5240_R3612
31.1
RHH5269_R3641
91.9
Memory CD4 T-cell Th2 nTPM: 80.7
Samples: 4
Max nTPM: 95.3
Min nTPM: 51.2
RHH5305_R3671
80.9
RHH5213_R3584
95.3
RHH5241_R3613
51.2
RHH5270_R3642
95.2
Naive CD4 T-cell nTPM: 69.8
Samples: 4
Max nTPM: 92.1
Min nTPM: 34.4
RHH5306_R3672
83.5
RHH5214_R3585
34.4
RHH5242_R3614
69.2
RHH5271_R3643
92.1
Naive CD8 T-cell nTPM: 49.8
Samples: 4
Max nTPM: 67.5
Min nTPM: 26.4
RHH5201_R3572
26.4
RHH5229_R3601
46.8
RHH5258_R3630
67.5
RHH5287_R3659
58.4
Non-Vd2 gdTCR nTPM: 112.3
Samples: 4
Max nTPM: 168.1
Min nTPM: 56.4
RHH5235_R3607
108.1
RHH5264_R3636
56.4
RHH5207_R3578
116.7
RHH5299_R3665
168.1
T-reg nTPM: 80.0
Samples: 4
Max nTPM: 106.6
Min nTPM: 44.2
RHH5301_R3667
106.6
RHH5237_R3609
68.5
RHH5266_R3638
100.6
RHH5209_R3580
44.2
Terminal effector memory CD4 T-cell nTPM: 107.8
Samples: 2
Max nTPM: 124.3
Min nTPM: 91.2
RHH5243_R3615
124.3
RHH5272_R3644
91.2
Terminal effector memory CD8 T-cell nTPM: 125.0
Samples: 4
Max nTPM: 159.9
Min nTPM: 104.2
RHH5232_R3604
104.2
RHH5204_R3575
122.7
RHH5261_R3633
159.9
RHH5296_R3662
113.3
Vd2 gdTCR nTPM: 119.4
Samples: 4
Max nTPM: 122.3
Min nTPM: 115.5
RHH5234_R3606
119.2
RHH5206_R3577
122.3
RHH5263_R3635
115.5
RHH5298_R3664
120.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
