We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
72.9
nTPM
Monaco:
43.9
nTPM
Schmiedel:
72.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
72.9
HPA sample
nTPM
gdT-cell nTPM: 72.9
Samples: 6
Max nTPM: 99.0
Min nTPM: 45.7
P10809_1007
45.7
P10809_1022
86.7
P10809_1041
99.0
P10809_1060
63.1
P10809_1077
68.8
P10809_1098
73.9
MAIT T-cell nTPM: 63.6
Samples: 6
Max nTPM: 105.8
Min nTPM: 35.7
P10809_1006
35.7
P10809_1024
65.8
P10809_1043
105.8
P10809_1062
55.9
P10809_1083
57.5
P10809_1097
60.6
Memory CD4 T-cell nTPM: 36.5
Samples: 6
Max nTPM: 46.6
Min nTPM: 22.3
P10809_1014
22.3
P10809_1026
32.4
P10809_1045
46.6
P10809_1064
45.1
P10809_1086
44.5
P10809_1113
28.3
Memory CD8 T-cell nTPM: 62.7
Samples: 5
Max nTPM: 91.1
Min nTPM: 28.0
P10809_1012
28.0
P10809_1027
75.5
P10809_1046
91.1
P10809_1065
61.9
P10809_1111
56.8
Naive CD4 T-cell nTPM: 30.9
Samples: 6
Max nTPM: 49.7
Min nTPM: 14.5
P10809_1015
14.5
P10809_1030
27.0
P10809_1049
49.7
P10809_1068
22.7
P10809_1085
43.8
P10809_1112
27.6
Naive CD8 T-cell nTPM: 48.6
Samples: 6
Max nTPM: 65.5
Min nTPM: 22.6
P10809_1016
22.6
P10809_1031
43.2
P10809_1050
65.5
P10809_1069
53.6
P10809_1087
65.1
P10809_1110
41.4
T-reg nTPM: 50.0
Samples: 6
Max nTPM: 97.0
Min nTPM: 27.4
P10809_1018
27.4
P10809_1037
36.4
P10809_1056
97.0
P10809_1075
33.3
P10809_1094
69.0
P10809_1106
36.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.7
Samples: 4
Max nTPM: 27.6
Min nTPM: 3.4
RHH5202_R3573
21.6
RHH5230_R3602
3.4
RHH5259_R3631
6.2
RHH5288_R3660
27.6
Effector memory CD8 T-cell nTPM: 33.6
Samples: 4
Max nTPM: 48.7
Min nTPM: 16.8
RHH5203_R3574
28.1
RHH5231_R3603
40.6
RHH5260_R3632
16.8
RHH5289_R3661
48.7
MAIT T-cell nTPM: 26.7
Samples: 4
Max nTPM: 32.2
Min nTPM: 20.2
RHH5233_R3605
26.2
RHH5205_R3576
20.2
RHH5262_R3634
32.2
RHH5297_R3663
28.0
Memory CD4 T-cell TFH nTPM: 19.7
Samples: 4
Max nTPM: 26.4
Min nTPM: 15.3
RHH5300_R3666
16.0
RHH5236_R3608
21.0
RHH5265_R3637
26.4
RHH5208_R3579
15.3
Memory CD4 T-cell Th1 nTPM: 15.3
Samples: 4
Max nTPM: 28.3
Min nTPM: 7.0
RHH5210_R3581
7.0
RHH5302_R3668
28.3
RHH5238_R3610
10.1
RHH5267_R3639
15.9
Memory CD4 T-cell Th1/Th17 nTPM: 14.9
Samples: 4
Max nTPM: 25.6
Min nTPM: 9.1
RHH5303_R3669
12.6
RHH5211_R3582
25.6
RHH5239_R3611
9.1
RHH5268_R3640
12.2
Memory CD4 T-cell Th17 nTPM: 15.6
Samples: 4
Max nTPM: 27.2
Min nTPM: 7.7
RHH5304_R3670
14.9
RHH5212_R3583
27.2
RHH5240_R3612
12.6
RHH5269_R3641
7.7
Memory CD4 T-cell Th2 nTPM: 11.6
Samples: 4
Max nTPM: 18.4
Min nTPM: 6.2
RHH5305_R3671
6.2
RHH5213_R3584
7.4
RHH5241_R3613
18.4
RHH5270_R3642
14.4
Naive CD4 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 18.8
Min nTPM: 0.0
RHH5306_R3672
18.8
RHH5214_R3585
17.4
RHH5242_R3614
1.6
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 10.4
Samples: 4
Max nTPM: 23.9
Min nTPM: 2.4
RHH5201_R3572
6.1
RHH5229_R3601
2.4
RHH5258_R3630
23.9
RHH5287_R3659
9.0
Non-Vd2 gdTCR nTPM: 37.8
Samples: 4
Max nTPM: 58.4
Min nTPM: 21.0
RHH5235_R3607
21.0
RHH5264_R3636
33.3
RHH5207_R3578
58.4
RHH5299_R3665
38.6
T-reg nTPM: 14.6
Samples: 4
Max nTPM: 23.2
Min nTPM: 8.6
RHH5301_R3667
15.8
RHH5237_R3609
23.2
RHH5266_R3638
10.7
RHH5209_R3580
8.6
Terminal effector memory CD4 T-cell nTPM: 41.3
Samples: 2
Max nTPM: 60.6
Min nTPM: 21.9
RHH5243_R3615
21.9
RHH5272_R3644
60.6
Terminal effector memory CD8 T-cell nTPM: 43.9
Samples: 4
Max nTPM: 55.3
Min nTPM: 38.1
RHH5232_R3604
43.5
RHH5204_R3575
38.5
RHH5261_R3633
38.1
RHH5296_R3662
55.3
Vd2 gdTCR nTPM: 29.8
Samples: 4
Max nTPM: 52.3
Min nTPM: 11.9
RHH5234_R3606
21.4
RHH5206_R3577
52.3
RHH5263_R3635
11.9
RHH5298_R3664
33.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
