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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
54.6
nTPM
Monaco:
205.1
nTPM
Schmiedel:
68.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.6
HPA sample
nTPM
gdT-cell nTPM: 47.1
Samples: 6
Max nTPM: 58.3
Min nTPM: 33.0
P10809_1007
39.7
P10809_1022
48.7
P10809_1041
50.6
P10809_1060
52.5
P10809_1077
58.3
P10809_1098
33.0
MAIT T-cell nTPM: 54.6
Samples: 6
Max nTPM: 69.0
Min nTPM: 45.8
P10809_1006
45.8
P10809_1024
49.7
P10809_1043
58.1
P10809_1062
69.0
P10809_1083
58.3
P10809_1097
46.4
Memory CD4 T-cell nTPM: 42.3
Samples: 6
Max nTPM: 49.9
Min nTPM: 34.7
P10809_1014
34.8
P10809_1026
42.8
P10809_1045
49.9
P10809_1064
45.1
P10809_1086
46.7
P10809_1113
34.7
Memory CD8 T-cell nTPM: 48.3
Samples: 5
Max nTPM: 57.7
Min nTPM: 37.3
P10809_1012
40.9
P10809_1027
57.7
P10809_1046
48.7
P10809_1065
57.0
P10809_1111
37.3
Naive CD4 T-cell nTPM: 52.7
Samples: 6
Max nTPM: 67.3
Min nTPM: 34.6
P10809_1015
34.6
P10809_1030
58.4
P10809_1049
67.3
P10809_1068
62.1
P10809_1085
59.3
P10809_1112
34.7
Naive CD8 T-cell nTPM: 43.4
Samples: 6
Max nTPM: 54.9
Min nTPM: 30.8
P10809_1016
30.8
P10809_1031
54.9
P10809_1050
53.7
P10809_1069
39.9
P10809_1087
45.8
P10809_1110
35.5
T-reg nTPM: 31.0
Samples: 6
Max nTPM: 46.9
Min nTPM: 22.7
P10809_1018
23.0
P10809_1037
22.7
P10809_1056
27.5
P10809_1075
46.9
P10809_1094
34.4
P10809_1106
31.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
205.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 195.4
Samples: 4
Max nTPM: 235.7
Min nTPM: 164.1
RHH5202_R3573
235.7
RHH5230_R3602
181.5
RHH5259_R3631
164.1
RHH5288_R3660
200.2
Effector memory CD8 T-cell nTPM: 186.0
Samples: 4
Max nTPM: 232.9
Min nTPM: 138.5
RHH5203_R3574
215.0
RHH5231_R3603
157.5
RHH5260_R3632
138.5
RHH5289_R3661
232.9
MAIT T-cell nTPM: 177.5
Samples: 4
Max nTPM: 200.0
Min nTPM: 155.4
RHH5233_R3605
190.2
RHH5205_R3576
155.4
RHH5262_R3634
200.0
RHH5297_R3663
164.3
Memory CD4 T-cell TFH nTPM: 186.6
Samples: 4
Max nTPM: 213.6
Min nTPM: 167.3
RHH5300_R3666
167.3
RHH5236_R3608
178.0
RHH5265_R3637
213.6
RHH5208_R3579
187.3
Memory CD4 T-cell Th1 nTPM: 177.8
Samples: 4
Max nTPM: 247.6
Min nTPM: 140.8
RHH5210_R3581
247.6
RHH5302_R3668
171.2
RHH5238_R3610
140.8
RHH5267_R3639
151.4
Memory CD4 T-cell Th1/Th17 nTPM: 175.5
Samples: 4
Max nTPM: 224.8
Min nTPM: 144.2
RHH5303_R3669
224.8
RHH5211_R3582
146.9
RHH5239_R3611
144.2
RHH5268_R3640
186.0
Memory CD4 T-cell Th17 nTPM: 156.2
Samples: 4
Max nTPM: 171.8
Min nTPM: 142.5
RHH5304_R3670
142.5
RHH5212_R3583
154.3
RHH5240_R3612
156.2
RHH5269_R3641
171.8
Memory CD4 T-cell Th2 nTPM: 182.5
Samples: 4
Max nTPM: 223.6
Min nTPM: 158.3
RHH5305_R3671
176.3
RHH5213_R3584
171.8
RHH5241_R3613
223.6
RHH5270_R3642
158.3
Naive CD4 T-cell nTPM: 205.1
Samples: 4
Max nTPM: 223.6
Min nTPM: 183.4
RHH5306_R3672
183.4
RHH5214_R3585
223.6
RHH5242_R3614
219.2
RHH5271_R3643
194.1
Naive CD8 T-cell nTPM: 196.8
Samples: 4
Max nTPM: 247.2
Min nTPM: 163.3
RHH5201_R3572
247.2
RHH5229_R3601
189.0
RHH5258_R3630
163.3
RHH5287_R3659
187.8
Non-Vd2 gdTCR nTPM: 189.6
Samples: 4
Max nTPM: 259.9
Min nTPM: 110.7
RHH5235_R3607
110.7
RHH5264_R3636
225.3
RHH5207_R3578
259.9
RHH5299_R3665
162.3
T-reg nTPM: 181.0
Samples: 4
Max nTPM: 224.1
Min nTPM: 130.8
RHH5301_R3667
158.1
RHH5237_R3609
211.0
RHH5266_R3638
130.8
RHH5209_R3580
224.1
Terminal effector memory CD4 T-cell nTPM: 194.9
Samples: 2
Max nTPM: 211.4
Min nTPM: 178.3
RHH5243_R3615
211.4
RHH5272_R3644
178.3
Terminal effector memory CD8 T-cell nTPM: 174.8
Samples: 4
Max nTPM: 187.7
Min nTPM: 151.2
RHH5232_R3604
178.5
RHH5204_R3575
181.6
RHH5261_R3633
151.2
RHH5296_R3662
187.7
Vd2 gdTCR nTPM: 154.7
Samples: 4
Max nTPM: 186.4
Min nTPM: 139.2
RHH5234_R3606
186.4
RHH5206_R3577
139.7
RHH5263_R3635
153.5
RHH5298_R3664
139.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
