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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
91.4
nTPM
Monaco:
145.8
nTPM
Schmiedel:
217.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.4
HPA sample
nTPM
gdT-cell nTPM: 58.8
Samples: 6
Max nTPM: 81.2
Min nTPM: 42.9
P10809_1007
42.9
P10809_1022
77.1
P10809_1041
81.2
P10809_1060
51.6
P10809_1077
54.7
P10809_1098
45.4
MAIT T-cell nTPM: 91.4
Samples: 6
Max nTPM: 110.7
Min nTPM: 58.3
P10809_1006
72.2
P10809_1024
110.7
P10809_1043
102.5
P10809_1062
95.0
P10809_1083
58.3
P10809_1097
109.5
Memory CD4 T-cell nTPM: 72.1
Samples: 6
Max nTPM: 91.7
Min nTPM: 54.3
P10809_1014
68.8
P10809_1026
80.8
P10809_1045
91.7
P10809_1064
54.3
P10809_1086
63.8
P10809_1113
73.3
Memory CD8 T-cell nTPM: 70.2
Samples: 5
Max nTPM: 80.2
Min nTPM: 47.6
P10809_1012
76.9
P10809_1027
74.5
P10809_1046
80.2
P10809_1065
47.6
P10809_1111
72.0
Naive CD4 T-cell nTPM: 83.0
Samples: 6
Max nTPM: 99.3
Min nTPM: 65.1
P10809_1015
78.4
P10809_1030
99.0
P10809_1049
99.3
P10809_1068
82.0
P10809_1085
65.1
P10809_1112
74.3
Naive CD8 T-cell nTPM: 75.3
Samples: 6
Max nTPM: 86.0
Min nTPM: 58.0
P10809_1016
86.0
P10809_1031
79.7
P10809_1050
79.6
P10809_1069
70.5
P10809_1087
58.0
P10809_1110
78.0
T-reg nTPM: 77.3
Samples: 6
Max nTPM: 110.2
Min nTPM: 50.0
P10809_1018
60.0
P10809_1037
110.2
P10809_1056
50.0
P10809_1075
68.4
P10809_1094
95.2
P10809_1106
80.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
145.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 116.6
Samples: 4
Max nTPM: 138.7
Min nTPM: 88.2
RHH5202_R3573
138.7
RHH5230_R3602
123.7
RHH5259_R3631
88.2
RHH5288_R3660
115.7
Effector memory CD8 T-cell nTPM: 135.2
Samples: 4
Max nTPM: 171.8
Min nTPM: 98.1
RHH5203_R3574
171.8
RHH5231_R3603
107.5
RHH5260_R3632
98.1
RHH5289_R3661
163.5
MAIT T-cell nTPM: 145.8
Samples: 4
Max nTPM: 175.7
Min nTPM: 123.6
RHH5233_R3605
135.0
RHH5205_R3576
175.7
RHH5262_R3634
148.9
RHH5297_R3663
123.6
Memory CD4 T-cell TFH nTPM: 112.8
Samples: 4
Max nTPM: 120.6
Min nTPM: 104.6
RHH5300_R3666
108.6
RHH5236_R3608
117.5
RHH5265_R3637
120.6
RHH5208_R3579
104.6
Memory CD4 T-cell Th1 nTPM: 115.1
Samples: 4
Max nTPM: 155.4
Min nTPM: 66.3
RHH5210_R3581
155.4
RHH5302_R3668
115.8
RHH5238_R3610
66.3
RHH5267_R3639
122.9
Memory CD4 T-cell Th1/Th17 nTPM: 125.5
Samples: 4
Max nTPM: 150.1
Min nTPM: 94.1
RHH5303_R3669
147.9
RHH5211_R3582
150.1
RHH5239_R3611
94.1
RHH5268_R3640
109.9
Memory CD4 T-cell Th17 nTPM: 115.0
Samples: 4
Max nTPM: 128.0
Min nTPM: 102.8
RHH5304_R3670
128.0
RHH5212_R3583
114.7
RHH5240_R3612
114.6
RHH5269_R3641
102.8
Memory CD4 T-cell Th2 nTPM: 131.8
Samples: 4
Max nTPM: 159.1
Min nTPM: 118.3
RHH5305_R3671
122.2
RHH5213_R3584
159.1
RHH5241_R3613
127.4
RHH5270_R3642
118.3
Naive CD4 T-cell nTPM: 119.8
Samples: 4
Max nTPM: 131.8
Min nTPM: 107.9
RHH5306_R3672
123.4
RHH5214_R3585
131.8
RHH5242_R3614
107.9
RHH5271_R3643
116.0
Naive CD8 T-cell nTPM: 138.2
Samples: 4
Max nTPM: 174.8
Min nTPM: 85.9
RHH5201_R3572
174.8
RHH5229_R3601
85.9
RHH5258_R3630
138.9
RHH5287_R3659
153.1
Non-Vd2 gdTCR nTPM: 116.0
Samples: 4
Max nTPM: 135.5
Min nTPM: 97.4
RHH5235_R3607
97.4
RHH5264_R3636
135.5
RHH5207_R3578
126.4
RHH5299_R3665
104.5
T-reg nTPM: 121.2
Samples: 4
Max nTPM: 124.3
Min nTPM: 119.2
RHH5301_R3667
119.9
RHH5237_R3609
119.2
RHH5266_R3638
121.4
RHH5209_R3580
124.3
Terminal effector memory CD4 T-cell nTPM: 80.1
Samples: 2
Max nTPM: 94.5
Min nTPM: 65.7
RHH5243_R3615
65.7
RHH5272_R3644
94.5
Terminal effector memory CD8 T-cell nTPM: 96.0
Samples: 4
Max nTPM: 113.1
Min nTPM: 84.9
RHH5232_R3604
89.7
RHH5204_R3575
84.9
RHH5261_R3633
96.4
RHH5296_R3662
113.1
Vd2 gdTCR nTPM: 122.1
Samples: 4
Max nTPM: 133.6
Min nTPM: 106.2
RHH5234_R3606
133.6
RHH5206_R3577
125.1
RHH5263_R3635
123.4
RHH5298_R3664
106.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
