HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:16.3 nTPM
HPA Brain:56.7 nTPM
GTEx:16.3 nTPM
FANTOM5:104.7 Scaled Tags Per Million
Pig:18.5 nTPM
Mouse:3.3 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002276
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.7
Sample id Sample description nTPM
Hippocampus
nTPM: 56.7
2148 Female, age 91, left hemisphere 63.1
1898 Male, age 80, left hemisphere 60.5
2529 Female, age 94, left hemisphere 59.8
1911 Female, age 85, right hemisphere 59.4
1855 Male, age 76, left hemisphere 56.3
2621 Female, age 67, right hemisphere 40.9
Dentate gyrus
nTPM: 50.2
2528 Male, age 74, both hemispheres 75.0
2246 Female, age 85, both hemispheres 54.3
2530 Female, age 94, left hemisphere 49.5
2010 Male, age 76, both hemispheres 49.1
1927 Female, age 91, both hemispheres 41.5
2531 Female, age 67, both hemispheres 31.6
Entorhinal gyrus
nTPM: 44.1
2117 Female, age 91, right hemisphere 66.5
1787 Male, age 76, left hemisphere 50.3
1938 Female, age 85, left hemisphere 49.9
2764 Male, age 80, right hemisphere 36.1
2686 Male, age 75, right hemisphere 35.9
2613 Female, age 94, left hemisphere 25.9
Hippocampus, CA1
nTPM: 51.8
1873 Female, age 85, both hemispheres 67.6
2527 Male, age 74, both hemispheres 67.0
2045 Male, age 76, both hemispheres 49.0
2082 Female, age 91, right hemisphere 48.8
2749 Male, age 80, left hemisphere 26.7
Hippocampus, CA2
nTPM: 47.6
2249 Male, age 74, both hemispheres 66.2
2113 Female, age 91, right hemisphere 58.5
1940 Female, age 85, left hemisphere 46.8
2437 Female, age 94, left hemisphere 44.6
1963 Male, age 80, left hemisphere 41.5
1892 Male, age 76, both hemispheres 27.7
Hippocampus, CA3
nTPM: 44.7
1891 Female, age 85, both hemispheres 63.4
2436 Male, age 74, both hemispheres 49.0
2620 Female, age 94, left hemisphere 48.8
2861 Female, age 67, both hemispheres 42.4
1867 Male, age 76, both hemispheres 35.9
2137 Male, age 80, left hemisphere 28.4
Parahippocampal cortex
nTPM: 44.1
2692 Male, age 74, both hemispheres 54.3
1933 Female, age 85, both hemispheres 52.6
2250 Female, age 67, right hemisphere 52.3
2018 Male, age 76, both hemispheres 50.2
2622 Female, age 67, right hemisphere 43.4
1990 Female, age 91, right hemisphere 43.0
2245 Female, age 91, both hemispheres 41.7
1850 Male, age 80, both hemispheres 40.4
2693 Female, age 94, both hemispheres 33.1
2532 Female, age 72, left hemisphere 29.6
Perirhinal gyrus
nTPM: 40.8
1847 Female, age 91, left hemisphere 46.9
1841 Female, age 85, right hemisphere 43.5
1794 Male, age 80, right hemisphere 40.7
2848 Male, age 76, right hemisphere 39.0
2521 Female, age 94, right hemisphere 33.8
Subiculum
nTPM: 52.6
2729 Female, age 91, right hemisphere 81.9
2619 Male, age 74, both hemispheres 69.7
2042 Male, age 76, both hemispheres 47.6
2438 Female, age 94, left hemisphere 40.3
1977 Female, age 85, both hemispheres 40.2
1901 Male, age 80, both hemispheres 36.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 45.3
Min nTPM: 3.4
Std nTPM: 7.1
Median nTPM: 15.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 45.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 44.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 42.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 37.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 34.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 32.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 30.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 29.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 28.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 28.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 28.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.7
FF:10153-102I9 76 years, female 114.9
FF:10169-103B7 60 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.5
Pig sample Sample description nTPM
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.3
Sample A Female 16.6
Sample B Female 19.9
Sample C Male 16.3
Sample D Male 18.1
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 21.8
Min nTPM: 15.9
Sample A Female 18.8
Sample B Female 15.9
Sample C Male 21.8
Sample D Male 17.6
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.3
Sample A Female 9.0
Sample B Female 8.3
Sample C Male 11.4
Sample D Male 9.3
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 18.4
Min nTPM: 16.4
Sample A Female 17.1
Sample B Female 18.4
Sample C Male 18.0
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.5
Sample A Male 3.4
Sample B Male 2.5
Sample C Female 3.1
Sample D Female 2.6
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.5
Sample A Male 3.0
Sample B Male 3.7
Sample C Female 2.5
Sample D Female 4.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68744456 Antisense, RP_050203_02_H11, Mouse strain C57BL/6J (56 days, male) 0.6

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