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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.0
nTPM
Monaco:
108.4
nTPM
Schmiedel:
74.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.0
HPA sample
nTPM
gdT-cell nTPM: 27.7
Samples: 6
Max nTPM: 41.3
Min nTPM: 13.2
P10809_1007
38.1
P10809_1022
34.2
P10809_1041
13.2
P10809_1060
15.3
P10809_1077
23.9
P10809_1098
41.3
MAIT T-cell nTPM: 27.4
Samples: 6
Max nTPM: 42.5
Min nTPM: 12.9
P10809_1006
34.1
P10809_1024
12.9
P10809_1043
24.9
P10809_1062
24.3
P10809_1083
25.8
P10809_1097
42.5
Memory CD4 T-cell nTPM: 31.0
Samples: 6
Max nTPM: 44.6
Min nTPM: 18.1
P10809_1014
36.8
P10809_1026
32.5
P10809_1045
30.3
P10809_1064
44.6
P10809_1086
23.5
P10809_1113
18.1
Memory CD8 T-cell nTPM: 32.0
Samples: 5
Max nTPM: 44.6
Min nTPM: 14.5
P10809_1012
44.6
P10809_1027
14.5
P10809_1046
33.2
P10809_1065
35.0
P10809_1111
32.8
Naive CD4 T-cell nTPM: 24.0
Samples: 6
Max nTPM: 28.0
Min nTPM: 18.7
P10809_1015
25.0
P10809_1030
24.5
P10809_1049
18.7
P10809_1068
27.3
P10809_1085
20.3
P10809_1112
28.0
Naive CD8 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 39.0
Min nTPM: 12.0
P10809_1016
30.7
P10809_1031
26.3
P10809_1050
23.8
P10809_1069
39.0
P10809_1087
12.0
P10809_1110
35.3
T-reg nTPM: 28.1
Samples: 6
Max nTPM: 48.5
Min nTPM: 12.4
P10809_1018
31.7
P10809_1037
48.5
P10809_1056
18.5
P10809_1075
32.6
P10809_1094
12.4
P10809_1106
24.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.1
Samples: 4
Max nTPM: 106.8
Min nTPM: 50.0
RHH5202_R3573
50.0
RHH5230_R3602
106.8
RHH5259_R3631
85.3
RHH5288_R3660
58.1
Effector memory CD8 T-cell nTPM: 73.9
Samples: 4
Max nTPM: 108.4
Min nTPM: 31.1
RHH5203_R3574
67.4
RHH5231_R3603
88.8
RHH5260_R3632
108.4
RHH5289_R3661
31.1
MAIT T-cell nTPM: 89.5
Samples: 4
Max nTPM: 125.1
Min nTPM: 56.6
RHH5233_R3605
56.6
RHH5205_R3576
101.1
RHH5262_R3634
125.1
RHH5297_R3663
75.0
Memory CD4 T-cell TFH nTPM: 72.4
Samples: 4
Max nTPM: 110.5
Min nTPM: 37.8
RHH5300_R3666
66.4
RHH5236_R3608
110.5
RHH5265_R3637
75.0
RHH5208_R3579
37.8
Memory CD4 T-cell Th1 nTPM: 83.1
Samples: 4
Max nTPM: 111.7
Min nTPM: 53.1
RHH5210_R3581
73.6
RHH5302_R3668
53.1
RHH5238_R3610
93.9
RHH5267_R3639
111.7
Memory CD4 T-cell Th1/Th17 nTPM: 108.4
Samples: 4
Max nTPM: 144.3
Min nTPM: 31.7
RHH5303_R3669
31.7
RHH5211_R3582
118.7
RHH5239_R3611
144.3
RHH5268_R3640
139.0
Memory CD4 T-cell Th17 nTPM: 97.6
Samples: 4
Max nTPM: 148.2
Min nTPM: 55.3
RHH5304_R3670
55.3
RHH5212_R3583
148.2
RHH5240_R3612
77.0
RHH5269_R3641
109.7
Memory CD4 T-cell Th2 nTPM: 91.2
Samples: 4
Max nTPM: 124.4
Min nTPM: 35.2
RHH5305_R3671
86.8
RHH5213_R3584
124.4
RHH5241_R3613
35.2
RHH5270_R3642
118.3
Naive CD4 T-cell nTPM: 71.8
Samples: 4
Max nTPM: 81.9
Min nTPM: 59.4
RHH5306_R3672
68.0
RHH5214_R3585
78.0
RHH5242_R3614
59.4
RHH5271_R3643
81.9
Naive CD8 T-cell nTPM: 61.3
Samples: 4
Max nTPM: 79.5
Min nTPM: 22.0
RHH5201_R3572
22.0
RHH5229_R3601
69.1
RHH5258_R3630
79.5
RHH5287_R3659
74.7
Non-Vd2 gdTCR nTPM: 86.2
Samples: 4
Max nTPM: 124.8
Min nTPM: 51.6
RHH5235_R3607
104.5
RHH5264_R3636
51.6
RHH5207_R3578
63.8
RHH5299_R3665
124.8
T-reg nTPM: 91.2
Samples: 4
Max nTPM: 106.5
Min nTPM: 78.7
RHH5301_R3667
78.7
RHH5237_R3609
84.9
RHH5266_R3638
106.5
RHH5209_R3580
94.7
Terminal effector memory CD4 T-cell nTPM: 79.1
Samples: 2
Max nTPM: 94.4
Min nTPM: 63.8
RHH5243_R3615
94.4
RHH5272_R3644
63.8
Terminal effector memory CD8 T-cell nTPM: 71.2
Samples: 4
Max nTPM: 110.1
Min nTPM: 24.1
RHH5232_R3604
67.3
RHH5204_R3575
83.4
RHH5261_R3633
110.1
RHH5296_R3662
24.1
Vd2 gdTCR nTPM: 80.8
Samples: 4
Max nTPM: 91.5
Min nTPM: 72.0
RHH5234_R3606
72.0
RHH5206_R3577
78.6
RHH5263_R3635
91.5
RHH5298_R3664
80.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
