HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:16.3 nTPM
HPA Brain:15.0 nTPM
GTEx:16.3 nTPM
FANTOM5:28.3 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:13.8 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056283
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.0
Sample id Sample description nTPM
Hippocampus
nTPM: 14.4
1898 Male, age 80, left hemisphere 19.0
2529 Female, age 94, left hemisphere 15.2
2621 Female, age 67, right hemisphere 14.7
1911 Female, age 85, right hemisphere 14.1
1855 Male, age 76, left hemisphere 11.8
2148 Female, age 91, left hemisphere 11.3
Dentate gyrus
nTPM: 13.2
2530 Female, age 94, left hemisphere 18.5
2528 Male, age 74, both hemispheres 15.9
2010 Male, age 76, both hemispheres 12.3
1927 Female, age 91, both hemispheres 12.1
2531 Female, age 67, both hemispheres 10.3
2246 Female, age 85, both hemispheres 9.8
Entorhinal gyrus
nTPM: 15.0
2117 Female, age 91, right hemisphere 21.7
2613 Female, age 94, left hemisphere 16.2
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 15.0
1787 Male, age 76, left hemisphere 13.6
2686 Male, age 75, right hemisphere 8.3
Hippocampus, CA1
nTPM: 11.5
2527 Male, age 74, both hemispheres 15.4
2749 Male, age 80, left hemisphere 14.6
1873 Female, age 85, both hemispheres 11.4
2082 Female, age 91, right hemisphere 8.9
2045 Male, age 76, both hemispheres 7.1
Hippocampus, CA2
nTPM: 12.9
1963 Male, age 80, left hemisphere 15.6
2249 Male, age 74, both hemispheres 14.3
2437 Female, age 94, left hemisphere 13.8
1892 Male, age 76, both hemispheres 13.5
1940 Female, age 85, left hemisphere 10.5
2113 Female, age 91, right hemisphere 9.5
Hippocampus, CA3
nTPM: 11.5
2861 Female, age 67, both hemispheres 12.9
1891 Female, age 85, both hemispheres 12.0
2137 Male, age 80, left hemisphere 11.8
1867 Male, age 76, both hemispheres 11.2
2436 Male, age 74, both hemispheres 10.7
2620 Female, age 94, left hemisphere 10.5
Parahippocampal cortex
nTPM: 11.2
1850 Male, age 80, both hemispheres 15.0
2018 Male, age 76, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.2
1933 Female, age 85, both hemispheres 13.2
2245 Female, age 91, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.7
2692 Male, age 74, both hemispheres 10.2
2250 Female, age 67, right hemisphere 7.9
2693 Female, age 94, both hemispheres 7.1
2622 Female, age 67, right hemisphere 6.5
Perirhinal gyrus
nTPM: 13.9
1847 Female, age 91, left hemisphere 17.3
1794 Male, age 80, right hemisphere 15.8
1841 Female, age 85, right hemisphere 14.9
2848 Male, age 76, right hemisphere 11.6
2521 Female, age 94, right hemisphere 10.0
Subiculum
nTPM: 10.3
2729 Female, age 91, right hemisphere 15.1
1901 Male, age 80, both hemispheres 13.5
1977 Female, age 85, both hemispheres 11.7
2619 Male, age 74, both hemispheres 10.5
2042 Male, age 76, both hemispheres 9.1
2438 Female, age 94, left hemisphere 2.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 28.7
Min nTPM: 7.4
Std nTPM: 4.1
Median nTPM: 15.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 28.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 27.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 26.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 25.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 25.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 24.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 24.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 24.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 23.6
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 23.6
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 23.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.3
FF:10169-103B7 60 years, female 31.1
FF:10153-102I9 76 years, female 25.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 19.2
Min nTPM: 15.5
Sample A Female 19.2
Sample B Female 15.5
Sample C Male 16.3
Sample D Male 15.8
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 27.1
Min nTPM: 15.4
Sample A Female 27.1
Sample B Female 21.0
Sample C Male 24.6
Sample D Male 15.4
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 18.2
Min nTPM: 15.6
Sample A Female 18.1
Sample B Female 18.2
Sample C Male 17.2
Sample D Male 15.6
Ventral hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 14.6
Sample A Female 19.9
Sample B Female 14.6
Sample C Male 21.8
Sample D Male 19.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 14.5
Min nTPM: 13.2
Sample A Male 13.2
Sample B Male 14.0
Sample C Female 13.5
Sample D Female 14.5
Hippocampal formation
nTPM: 13.7
Samples: 4

Max nTPM: 14.3
Min nTPM: 13.3
Sample A Male 13.7
Sample B Male 13.3
Sample C Female 14.3
Sample D Female 13.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
576436 Antisense, RP_040826_01_H12, Mouse strain C57BL/6J (56 days, male) 23.4
81599662 Antisense, RP_071213_04_B06, Mouse strain C57BL/6J (56 days, male) 2.8

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