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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.6
nTPM
Monaco:
109.5
nTPM
Schmiedel:
162.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.6
HPA sample
nTPM
gdT-cell nTPM: 36.4
Samples: 6
Max nTPM: 41.0
Min nTPM: 29.7
P10809_1007
40.9
P10809_1022
29.7
P10809_1041
31.1
P10809_1060
37.1
P10809_1077
41.0
P10809_1098
38.8
MAIT T-cell nTPM: 43.7
Samples: 6
Max nTPM: 57.3
Min nTPM: 31.4
P10809_1006
51.4
P10809_1024
31.4
P10809_1043
40.5
P10809_1062
37.8
P10809_1083
43.9
P10809_1097
57.3
Memory CD4 T-cell nTPM: 44.5
Samples: 6
Max nTPM: 55.4
Min nTPM: 36.2
P10809_1014
55.4
P10809_1026
36.2
P10809_1045
40.9
P10809_1064
40.5
P10809_1086
46.9
P10809_1113
47.3
Memory CD8 T-cell nTPM: 47.0
Samples: 5
Max nTPM: 54.6
Min nTPM: 42.3
P10809_1012
54.6
P10809_1027
48.6
P10809_1046
42.3
P10809_1065
43.3
P10809_1111
46.3
Naive CD4 T-cell nTPM: 51.9
Samples: 6
Max nTPM: 63.5
Min nTPM: 33.5
P10809_1015
63.5
P10809_1030
61.2
P10809_1049
33.5
P10809_1068
47.1
P10809_1085
48.7
P10809_1112
57.6
Naive CD8 T-cell nTPM: 46.0
Samples: 6
Max nTPM: 60.6
Min nTPM: 36.3
P10809_1016
60.6
P10809_1031
42.8
P10809_1050
37.4
P10809_1069
36.3
P10809_1087
43.5
P10809_1110
55.1
T-reg nTPM: 58.6
Samples: 6
Max nTPM: 73.8
Min nTPM: 50.4
P10809_1018
51.5
P10809_1037
61.1
P10809_1056
50.4
P10809_1075
51.2
P10809_1094
73.8
P10809_1106
63.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.8
Samples: 4
Max nTPM: 103.5
Min nTPM: 66.1
RHH5202_R3573
101.3
RHH5230_R3602
72.3
RHH5259_R3631
66.1
RHH5288_R3660
103.5
Effector memory CD8 T-cell nTPM: 65.2
Samples: 4
Max nTPM: 92.3
Min nTPM: 50.6
RHH5203_R3574
55.9
RHH5231_R3603
92.3
RHH5260_R3632
62.1
RHH5289_R3661
50.6
MAIT T-cell nTPM: 80.7
Samples: 4
Max nTPM: 103.7
Min nTPM: 54.3
RHH5233_R3605
96.3
RHH5205_R3576
54.3
RHH5262_R3634
68.6
RHH5297_R3663
103.7
Memory CD4 T-cell TFH nTPM: 109.5
Samples: 4
Max nTPM: 146.2
Min nTPM: 83.2
RHH5300_R3666
106.1
RHH5236_R3608
146.2
RHH5265_R3637
83.2
RHH5208_R3579
102.5
Memory CD4 T-cell Th1 nTPM: 92.5
Samples: 4
Max nTPM: 126.4
Min nTPM: 54.4
RHH5210_R3581
100.9
RHH5302_R3668
126.4
RHH5238_R3610
88.3
RHH5267_R3639
54.4
Memory CD4 T-cell Th1/Th17 nTPM: 88.9
Samples: 4
Max nTPM: 120.2
Min nTPM: 64.7
RHH5303_R3669
102.3
RHH5211_R3582
120.2
RHH5239_R3611
68.3
RHH5268_R3640
64.7
Memory CD4 T-cell Th17 nTPM: 79.6
Samples: 4
Max nTPM: 121.8
Min nTPM: 53.5
RHH5304_R3670
73.0
RHH5212_R3583
121.8
RHH5240_R3612
70.0
RHH5269_R3641
53.5
Memory CD4 T-cell Th2 nTPM: 101.3
Samples: 4
Max nTPM: 150.9
Min nTPM: 64.7
RHH5305_R3671
100.9
RHH5213_R3584
88.7
RHH5241_R3613
150.9
RHH5270_R3642
64.7
Naive CD4 T-cell nTPM: 91.1
Samples: 4
Max nTPM: 107.1
Min nTPM: 53.8
RHH5306_R3672
100.3
RHH5214_R3585
107.1
RHH5242_R3614
103.2
RHH5271_R3643
53.8
Naive CD8 T-cell nTPM: 100.5
Samples: 4
Max nTPM: 126.0
Min nTPM: 81.9
RHH5201_R3572
126.0
RHH5229_R3601
86.1
RHH5258_R3630
108.1
RHH5287_R3659
81.9
Non-Vd2 gdTCR nTPM: 74.2
Samples: 4
Max nTPM: 116.0
Min nTPM: 59.0
RHH5235_R3607
59.6
RHH5264_R3636
62.2
RHH5207_R3578
59.0
RHH5299_R3665
116.0
T-reg nTPM: 93.7
Samples: 4
Max nTPM: 115.1
Min nTPM: 70.3
RHH5301_R3667
115.1
RHH5237_R3609
102.1
RHH5266_R3638
70.3
RHH5209_R3580
87.4
Terminal effector memory CD4 T-cell nTPM: 67.6
Samples: 2
Max nTPM: 70.1
Min nTPM: 65.1
RHH5243_R3615
65.1
RHH5272_R3644
70.1
Terminal effector memory CD8 T-cell nTPM: 106.3
Samples: 4
Max nTPM: 158.6
Min nTPM: 59.9
RHH5232_R3604
107.5
RHH5204_R3575
158.6
RHH5261_R3633
59.9
RHH5296_R3662
99.3
Vd2 gdTCR nTPM: 97.9
Samples: 4
Max nTPM: 116.2
Min nTPM: 68.3
RHH5234_R3606
94.3
RHH5206_R3577
112.8
RHH5263_R3635
68.3
RHH5298_R3664
116.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
