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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
171.8
nTPM
FANTOM5:
109.0
Scaled Tags Per Million
Pig:
50.9
nTPM
Allen mouse:
1.0
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
171.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 132.3
1984
Male, age 76, both hemispheres
151.8
2188
Female, age 91, both hemispheres
146.5
2090
Male, age 80, both hemispheres
123.5
2301
Female, age 85, both hemispheres
107.3
Dorsal cochlear nucleus nTPM: 132.4
2802
Male, age 74, right hemisphere
138.2
2378
Male, age 80, both hemispheres
137.6
2187
Female, age 91, both hemispheres
135.2
2370
Male, age 61, both hemispheres
126.9
2058
Male, age 76, both hemispheres
124.0
Dorsal tegmental nucleus nTPM: 132.7
2083
Male, age 80, both hemispheres
157.6
2326
Male, age 74, both hemispheres
145.3
1936
Male, age 76, left hemisphere
123.6
2358
Male, age 61, both hemispheres
104.2
Dorsolateral tegmental area nTPM: 139.0
2654
Male, age 80, both hemispheres
181.0
2751
Female, age 85, both hemispheres
158.3
2141
Male, age 76, both hemispheres
137.2
2360
Male, age 74, both hemispheres
129.3
2337
Male, age 61, both hemispheres
89.1
Kolliker-Fuse nucleus nTPM: 138.9
2793
Female, age 91, left hemisphere
144.7
2315
Male, age 76, right hemisphere
139.4
2163
Male, age 80, both hemispheres
132.5
Lateral lemniscal nuclei nTPM: 135.9
2169
Male, age 76, both hemispheres
158.1
2036
Male, age 80, both hemispheres
154.2
2746
Female, age 85, left hemisphere
129.8
2320
Female, age 91, left hemisphere
120.0
2453
Male, age 74, right hemisphere
117.7
Lateral parabrachial nucleus nTPM: 129.4
2792
Male, age 76, both hemispheres
147.1
2139
Female, age 85, right hemisphere
140.9
2013
Male, age 80, both hemispheres
123.4
2790
Male, age 61, both hemispheres
106.3
Lateral vestibular nucleus nTPM: 116.3
2311
Male, age 80, both hemispheres
122.6
2184
Male, age 76, both hemispheres
109.9
Locus coeruleus nTPM: 125.5
2720
Male, age 74, both hemispheres
143.5
2162
Male, age 80, both hemispheres
131.2
2788
Male, age 74, unknown
130.2
2014
Male, age 55, unknown
128.8
2123
Female, age 91, both hemispheres
127.6
2317
Female, age 72, unknown
122.9
1980
Male, age 76, both hemispheres
94.1
Medial parabrachial nucleus nTPM: 135.5
2170
Female, age 91, both hemispheres
155.4
2463
Female, age 85, right hemisphere
144.5
2854
Male, age 80, both hemispheres
138.1
2786
Male, age 76, both hemispheres
121.1
2156
Male, age 61, both hemispheres
118.5
Medial periolivary nuclei nTPM: 137.4
2063
Male, age 76, both hemispheres
185.2
2171
Female, age 85, both hemispheres
162.4
2791
Male, age 74, right hemisphere
113.9
2081
Male, age 80, both hemispheres
113.2
2458
Female, age 91, both hemispheres
112.3
Motor facial nucleus nTPM: 133.0
2062
Male, age 76, both hemispheres
177.8
2697
Female, age 85, both hemispheres
152.7
2795
Female, age 91, both hemispheres
127.5
2365
Male, age 74, right hemisphere
123.0
2327
Male, age 80, both hemispheres
108.9
2126
Male, age 61, both hemispheres
108.0
Motor trigeminal nucleus nTPM: 120.4
2309
Male, age 76, both hemispheres
132.6
2560
Male, age 74, both hemispheres
125.8
2079
Male, age 80, both hemispheres
119.1
2335
Male, age 61, both hemispheres
118.9
2321
Female, age 91, both hemispheres
105.7
Nuclei of the trapezoid body nTPM: 154.4
1983
Male, age 76, both hemispheres
184.1
2159
Male, age 61, both hemispheres
174.4
2735
Female, age 85, both hemispheres
161.3
2166
Male, age 80, both hemispheres
133.0
2368
Female, age 91, both hemispheres
119.0
Nucleus raphe magnus nTPM: 137.8
2160
Male, age 61, both hemispheres
170.5
2172
Female, age 85, both hemispheres
156.9
2051
Male, age 76, both hemispheres
137.7
2455
Male, age 74, both hemispheres
128.0
2328
Male, age 80, both hemispheres
122.3
2459
Female, age 91, both hemispheres
111.8
Paramedian reticular nucleus nTPM: 148.6
2050
Female, age 85, both hemispheres
168.2
2052
Male, age 76, both hemispheres
147.8
2313
Male, age 61, both hemispheres
141.8
2057
Male, age 80, both hemispheres
136.5
Pedunculopontine tegmental nucleus nTPM: 136.3
1921
Female, age 85, both hemispheres
166.5
2334
Male, age 80, both hemispheres
137.3
2338
Male, age 61, both hemispheres
105.2
Pontine nuclei nTPM: 151.5
1863
Male, age 55, unknown
199.4
2787
Female, age 85, both hemispheres
187.3
2727
Male, age 61, right hemisphere
167.5
1968
Male, age 76, left hemisphere
153.1
2109
Female, age 72, unknown
141.3
2319
Female, age 91, both hemispheres
130.7
2454
Male, age 74, left hemisphere
124.2
2115
Male, age 80, left hemisphere
108.8
Pontine raphe nucleus nTPM: 171.8
2122
Female, age 85, midline
196.4
2853
Male, age 76, midline
147.2
Posteroventral cochlear nucleus nTPM: 141.0
2752
Female, age 85, both hemispheres
156.8
2135
Female, age 91, both hemispheres
146.7
2341
Male, age 80, both hemispheres
142.2
2371
Male, age 61, both hemispheres
135.6
2070
Male, age 76, both hemispheres
123.8
Principal sensory trigeminal nucleus nTPM: 133.2
2158
Male, age 61, both hemispheres
173.0
2008
Male, age 80, left hemisphere
131.3
2367
Female, age 91, left hemisphere
120.3
2324
Male, age 76, both hemispheres
107.9
Reticular pontine nucleus, caudal nTPM: 139.8
2092
Male, age 76, both hemispheres
160.1
2559
Male, age 74, both hemispheres
152.8
2457
Female, age 91, both hemispheres
128.5
2332
Male, age 80, right hemisphere
118.0
Reticular pontine nucleus, oral nTPM: 149.2
2012
Female, age 85, both hemispheres
164.4
2366
Female, age 91, both hemispheres
156.4
1939
Male, age 80, both hemispheres
152.6
2167
Male, age 76, both hemispheres
147.9
2361
Male, age 74, both hemispheres
124.5
Reticulotegmental nucleus nTPM: 126.1
2452
Male, age 74, both hemispheres
142.9
2325
Male, age 76, both hemispheres
125.8
2322
Female, age 91, both hemispheres
122.6
2333
Male, age 80, both hemispheres
113.0
Spinal trigeminal nucleus, oral nTPM: 129.3
2737
Female, age 85, both hemispheres
142.3
1978
Male, age 76, both hemispheres
136.0
2164
Male, age 80, both hemispheres
109.7
Subcoeruleus area nTPM: 149.1
2451
Male, age 74, both hemispheres
182.5
2369
Female, age 85, left hemisphere
154.8
2323
Female, age 91, left hemisphere
150.1
1958
Male, age 80, both hemispheres
137.9
2089
Male, age 76, left hemisphere
120.3
Superior olive nTPM: 145.6
1875
Female, age 85, both hemispheres
190.4
2020
Male, age 76, both hemispheres
175.1
2561
Female, age 91, both hemispheres
122.8
2364
Male, age 74, right hemisphere
121.0
2329
Male, age 80, right hemisphere
118.5
Ventral periolivary nuclei nTPM: 145.9
2023
Male, age 76, both hemispheres
174.1
2130
Female, age 85, both hemispheres
147.6
2165
Male, age 80, both hemispheres
137.5
2794
Female, age 91, left hemisphere
124.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 131.3
2840
Female, age 85, both hemispheres
148.7
1959
Male, age 76, both hemispheres
147.9
2359
Male, age 61, both hemispheres
130.9
2161
Male, age 80, both hemispheres
125.3
2449
Male, age 74, both hemispheres
118.5
2456
Female, age 91, both hemispheres
116.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
50.9
Pig sample
Sample description
nTPM
Pons nTPM: 50.9
Samples: 4
Max nTPM: 59.4
Min nTPM: 44.6
Sample A
Female
44.6
Sample B
Female
47.3
Sample C
Male
59.4
Sample D
Male
52.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
