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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.9
nTPM
Monaco:
167.8
nTPM
Schmiedel:
128.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.9
HPA sample
nTPM
gdT-cell nTPM: 60.7
Samples: 6
Max nTPM: 70.3
Min nTPM: 46.8
P10809_1007
63.2
P10809_1022
67.8
P10809_1041
67.3
P10809_1060
49.0
P10809_1077
70.3
P10809_1098
46.8
MAIT T-cell nTPM: 95.9
Samples: 6
Max nTPM: 109.7
Min nTPM: 79.5
P10809_1006
97.3
P10809_1024
109.7
P10809_1043
88.3
P10809_1062
103.1
P10809_1083
97.5
P10809_1097
79.5
Memory CD4 T-cell nTPM: 64.2
Samples: 6
Max nTPM: 70.4
Min nTPM: 44.2
P10809_1014
69.7
P10809_1026
44.2
P10809_1045
69.8
P10809_1064
62.5
P10809_1086
70.4
P10809_1113
68.5
Memory CD8 T-cell nTPM: 75.4
Samples: 5
Max nTPM: 87.4
Min nTPM: 68.4
P10809_1012
71.8
P10809_1027
71.5
P10809_1046
77.9
P10809_1065
87.4
P10809_1111
68.4
Naive CD4 T-cell nTPM: 42.7
Samples: 6
Max nTPM: 50.0
Min nTPM: 37.4
P10809_1015
45.2
P10809_1030
37.4
P10809_1049
37.5
P10809_1068
46.8
P10809_1085
50.0
P10809_1112
39.5
Naive CD8 T-cell nTPM: 52.1
Samples: 6
Max nTPM: 66.6
Min nTPM: 40.5
P10809_1016
56.2
P10809_1031
58.5
P10809_1050
42.0
P10809_1069
49.0
P10809_1087
66.6
P10809_1110
40.5
T-reg nTPM: 81.3
Samples: 6
Max nTPM: 104.1
Min nTPM: 57.4
P10809_1018
80.2
P10809_1037
97.2
P10809_1056
57.4
P10809_1075
83.6
P10809_1094
104.1
P10809_1106
65.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 101.3
Samples: 4
Max nTPM: 104.8
Min nTPM: 93.4
RHH5202_R3573
102.9
RHH5230_R3602
103.9
RHH5259_R3631
104.8
RHH5288_R3660
93.4
Effector memory CD8 T-cell nTPM: 110.6
Samples: 4
Max nTPM: 126.7
Min nTPM: 80.7
RHH5203_R3574
112.2
RHH5231_R3603
80.7
RHH5260_R3632
126.7
RHH5289_R3661
122.7
MAIT T-cell nTPM: 167.8
Samples: 4
Max nTPM: 194.9
Min nTPM: 140.8
RHH5233_R3605
154.8
RHH5205_R3576
194.9
RHH5262_R3634
180.8
RHH5297_R3663
140.8
Memory CD4 T-cell TFH nTPM: 101.2
Samples: 4
Max nTPM: 135.1
Min nTPM: 75.3
RHH5300_R3666
84.1
RHH5236_R3608
75.3
RHH5265_R3637
110.4
RHH5208_R3579
135.1
Memory CD4 T-cell Th1 nTPM: 118.0
Samples: 4
Max nTPM: 134.3
Min nTPM: 102.9
RHH5210_R3581
134.3
RHH5302_R3668
125.9
RHH5238_R3610
102.9
RHH5267_R3639
108.9
Memory CD4 T-cell Th1/Th17 nTPM: 164.2
Samples: 4
Max nTPM: 198.4
Min nTPM: 143.5
RHH5303_R3669
169.1
RHH5211_R3582
198.4
RHH5239_R3611
145.6
RHH5268_R3640
143.5
Memory CD4 T-cell Th17 nTPM: 142.7
Samples: 4
Max nTPM: 156.7
Min nTPM: 115.2
RHH5304_R3670
149.9
RHH5212_R3583
148.9
RHH5240_R3612
156.7
RHH5269_R3641
115.2
Memory CD4 T-cell Th2 nTPM: 133.8
Samples: 4
Max nTPM: 149.8
Min nTPM: 123.2
RHH5305_R3671
123.2
RHH5213_R3584
149.8
RHH5241_R3613
134.0
RHH5270_R3642
128.3
Naive CD4 T-cell nTPM: 73.3
Samples: 4
Max nTPM: 101.1
Min nTPM: 63.1
RHH5306_R3672
64.6
RHH5214_R3585
63.1
RHH5242_R3614
64.3
RHH5271_R3643
101.1
Naive CD8 T-cell nTPM: 74.1
Samples: 4
Max nTPM: 88.0
Min nTPM: 59.5
RHH5201_R3572
75.6
RHH5229_R3601
88.0
RHH5258_R3630
73.4
RHH5287_R3659
59.5
Non-Vd2 gdTCR nTPM: 107.5
Samples: 4
Max nTPM: 134.7
Min nTPM: 86.6
RHH5235_R3607
107.0
RHH5264_R3636
101.5
RHH5207_R3578
134.7
RHH5299_R3665
86.6
T-reg nTPM: 86.4
Samples: 4
Max nTPM: 96.1
Min nTPM: 78.8
RHH5301_R3667
96.1
RHH5237_R3609
84.2
RHH5266_R3638
86.5
RHH5209_R3580
78.8
Terminal effector memory CD4 T-cell nTPM: 135.6
Samples: 2
Max nTPM: 147.1
Min nTPM: 124.0
RHH5243_R3615
147.1
RHH5272_R3644
124.0
Terminal effector memory CD8 T-cell nTPM: 132.4
Samples: 4
Max nTPM: 159.2
Min nTPM: 119.1
RHH5232_R3604
119.1
RHH5204_R3575
159.2
RHH5261_R3633
129.7
RHH5296_R3662
121.6
Vd2 gdTCR nTPM: 118.9
Samples: 4
Max nTPM: 127.6
Min nTPM: 105.5
RHH5234_R3606
125.1
RHH5206_R3577
127.6
RHH5263_R3635
117.4
RHH5298_R3664
105.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
