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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
140.4
nTPM
FANTOM5:
128.4
Scaled Tags Per Million
Pig:
67.5
nTPM
Allen mouse:
8.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
140.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 102.4
2301
Female, age 85, both hemispheres
115.7
2090
Male, age 80, both hemispheres
100.6
1984
Male, age 76, both hemispheres
97.5
2188
Female, age 91, both hemispheres
95.8
Dorsal cochlear nucleus nTPM: 122.6
2802
Male, age 74, right hemisphere
148.6
2370
Male, age 61, both hemispheres
117.4
2058
Male, age 76, both hemispheres
116.1
2378
Male, age 80, both hemispheres
115.8
2187
Female, age 91, both hemispheres
115.3
Dorsal tegmental nucleus nTPM: 133.8
2358
Male, age 61, both hemispheres
201.7
2083
Male, age 80, both hemispheres
118.1
1936
Male, age 76, left hemisphere
110.1
2326
Male, age 74, both hemispheres
105.4
Dorsolateral tegmental area nTPM: 109.2
2337
Male, age 61, both hemispheres
120.7
2654
Male, age 80, both hemispheres
120.5
2141
Male, age 76, both hemispheres
114.5
2751
Female, age 85, both hemispheres
96.0
2360
Male, age 74, both hemispheres
94.1
Kolliker-Fuse nucleus nTPM: 126.6
2163
Male, age 80, both hemispheres
130.3
2315
Male, age 76, right hemisphere
130.0
2793
Female, age 91, left hemisphere
119.4
Lateral lemniscal nuclei nTPM: 106.8
2036
Male, age 80, both hemispheres
136.2
2169
Male, age 76, both hemispheres
107.7
2453
Male, age 74, right hemisphere
98.5
2746
Female, age 85, left hemisphere
97.5
2320
Female, age 91, left hemisphere
94.3
Lateral parabrachial nucleus nTPM: 122.8
2790
Male, age 61, both hemispheres
151.1
2792
Male, age 76, both hemispheres
121.4
2139
Female, age 85, right hemisphere
115.8
2013
Male, age 80, both hemispheres
103.0
Lateral vestibular nucleus nTPM: 121.1
2184
Male, age 76, both hemispheres
123.2
2311
Male, age 80, both hemispheres
119.0
Locus coeruleus nTPM: 140.4
2720
Male, age 74, both hemispheres
155.9
1980
Male, age 76, both hemispheres
147.8
2014
Male, age 55, unknown
145.9
2317
Female, age 72, unknown
144.5
2123
Female, age 91, both hemispheres
137.2
2162
Male, age 80, both hemispheres
126.3
2788
Male, age 74, unknown
125.0
Medial parabrachial nucleus nTPM: 122.6
2156
Male, age 61, both hemispheres
147.0
2854
Male, age 80, both hemispheres
125.4
2786
Male, age 76, both hemispheres
121.7
2170
Female, age 91, both hemispheres
114.9
2463
Female, age 85, right hemisphere
103.8
Medial periolivary nuclei nTPM: 99.5
2171
Female, age 85, both hemispheres
111.7
2063
Male, age 76, both hemispheres
98.1
2791
Male, age 74, right hemisphere
97.7
2081
Male, age 80, both hemispheres
96.5
2458
Female, age 91, both hemispheres
93.5
Motor facial nucleus nTPM: 106.0
2795
Female, age 91, both hemispheres
130.0
2697
Female, age 85, both hemispheres
116.5
2365
Male, age 74, right hemisphere
105.2
2062
Male, age 76, both hemispheres
100.6
2327
Male, age 80, both hemispheres
97.4
2126
Male, age 61, both hemispheres
86.4
Motor trigeminal nucleus nTPM: 106.6
2560
Male, age 74, both hemispheres
119.1
2335
Male, age 61, both hemispheres
111.1
2309
Male, age 76, both hemispheres
108.4
2321
Female, age 91, both hemispheres
98.2
2079
Male, age 80, both hemispheres
96.0
Nuclei of the trapezoid body nTPM: 96.9
2735
Female, age 85, both hemispheres
99.2
2368
Female, age 91, both hemispheres
98.5
2159
Male, age 61, both hemispheres
97.7
2166
Male, age 80, both hemispheres
95.3
1983
Male, age 76, both hemispheres
94.1
Nucleus raphe magnus nTPM: 105.6
2172
Female, age 85, both hemispheres
112.6
2160
Male, age 61, both hemispheres
112.5
2328
Male, age 80, both hemispheres
105.8
2051
Male, age 76, both hemispheres
103.1
2455
Male, age 74, both hemispheres
101.7
2459
Female, age 91, both hemispheres
98.2
Paramedian reticular nucleus nTPM: 110.2
2050
Female, age 85, both hemispheres
120.0
2313
Male, age 61, both hemispheres
108.9
2052
Male, age 76, both hemispheres
107.4
2057
Male, age 80, both hemispheres
104.7
Pedunculopontine tegmental nucleus nTPM: 115.4
2334
Male, age 80, both hemispheres
127.4
2338
Male, age 61, both hemispheres
113.9
1921
Female, age 85, both hemispheres
104.8
Pontine nuclei nTPM: 96.3
2787
Female, age 85, both hemispheres
127.9
1863
Male, age 55, unknown
102.2
2115
Male, age 80, left hemisphere
101.1
1968
Male, age 76, left hemisphere
93.8
2319
Female, age 91, both hemispheres
89.9
2109
Female, age 72, unknown
89.0
2727
Male, age 61, right hemisphere
86.3
2454
Male, age 74, left hemisphere
80.1
Pontine raphe nucleus nTPM: 109.1
2853
Male, age 76, midline
117.7
2122
Female, age 85, midline
100.4
Posteroventral cochlear nucleus nTPM: 104.4
2371
Male, age 61, both hemispheres
118.8
2070
Male, age 76, both hemispheres
110.7
2752
Female, age 85, both hemispheres
102.8
2341
Male, age 80, both hemispheres
102.5
2135
Female, age 91, both hemispheres
87.2
Principal sensory trigeminal nucleus nTPM: 104.2
2324
Male, age 76, both hemispheres
129.8
2158
Male, age 61, both hemispheres
104.3
2367
Female, age 91, left hemisphere
95.3
2008
Male, age 80, left hemisphere
87.6
Reticular pontine nucleus, caudal nTPM: 100.2
2332
Male, age 80, right hemisphere
106.1
2092
Male, age 76, both hemispheres
102.9
2457
Female, age 91, both hemispheres
99.1
2559
Male, age 74, both hemispheres
92.8
Reticular pontine nucleus, oral nTPM: 103.5
2167
Male, age 76, both hemispheres
113.9
1939
Male, age 80, both hemispheres
112.0
2366
Female, age 91, both hemispheres
100.2
2012
Female, age 85, both hemispheres
100.0
2361
Male, age 74, both hemispheres
91.2
Reticulotegmental nucleus nTPM: 114.5
2452
Male, age 74, both hemispheres
115.4
2333
Male, age 80, both hemispheres
115.1
2325
Male, age 76, both hemispheres
114.5
2322
Female, age 91, both hemispheres
113.1
Spinal trigeminal nucleus, oral nTPM: 110.9
2164
Male, age 80, both hemispheres
126.3
2737
Female, age 85, both hemispheres
103.6
1978
Male, age 76, both hemispheres
102.9
Subcoeruleus area nTPM: 110.4
2323
Female, age 91, left hemisphere
123.0
2451
Male, age 74, both hemispheres
120.2
1958
Male, age 80, both hemispheres
109.7
2369
Female, age 85, left hemisphere
100.7
2089
Male, age 76, left hemisphere
98.5
Superior olive nTPM: 102.3
2561
Female, age 91, both hemispheres
114.8
2329
Male, age 80, right hemisphere
106.2
1875
Female, age 85, both hemispheres
100.8
2020
Male, age 76, both hemispheres
94.9
2364
Male, age 74, right hemisphere
94.9
Ventral periolivary nuclei nTPM: 100.1
2130
Female, age 85, both hemispheres
112.6
2165
Male, age 80, both hemispheres
102.1
2794
Female, age 91, left hemisphere
98.1
2023
Male, age 76, both hemispheres
87.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 111.5
2840
Female, age 85, both hemispheres
129.5
2359
Male, age 61, both hemispheres
116.1
2161
Male, age 80, both hemispheres
113.5
1959
Male, age 76, both hemispheres
107.8
2456
Female, age 91, both hemispheres
101.7
2449
Male, age 74, both hemispheres
100.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
67.5
Pig sample
Sample description
nTPM
Pons nTPM: 67.5
Samples: 4
Max nTPM: 80.6
Min nTPM: 57.5
Sample A
Female
80.6
Sample B
Female
57.5
Sample C
Male
64.8
Sample D
Male
66.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
