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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
177.6
nTPM
Monaco:
193.9
nTPM
Schmiedel:
51.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
177.6
HPA sample
nTPM
gdT-cell nTPM: 131.6
Samples: 6
Max nTPM: 155.6
Min nTPM: 100.4
P10809_1007
100.4
P10809_1022
131.2
P10809_1041
155.6
P10809_1060
116.4
P10809_1077
145.4
P10809_1098
140.6
MAIT T-cell nTPM: 155.5
Samples: 6
Max nTPM: 186.1
Min nTPM: 111.9
P10809_1006
111.9
P10809_1024
183.9
P10809_1043
143.5
P10809_1062
133.8
P10809_1083
173.9
P10809_1097
186.1
Memory CD4 T-cell nTPM: 159.1
Samples: 6
Max nTPM: 174.0
Min nTPM: 135.3
P10809_1014
135.3
P10809_1026
166.4
P10809_1045
147.2
P10809_1064
158.3
P10809_1086
174.0
P10809_1113
173.2
Memory CD8 T-cell nTPM: 144.3
Samples: 5
Max nTPM: 176.8
Min nTPM: 116.0
P10809_1012
116.0
P10809_1027
136.9
P10809_1046
139.5
P10809_1065
152.1
P10809_1111
176.8
Naive CD4 T-cell nTPM: 147.3
Samples: 6
Max nTPM: 155.3
Min nTPM: 136.7
P10809_1015
136.7
P10809_1030
150.0
P10809_1049
146.8
P10809_1068
154.1
P10809_1085
141.0
P10809_1112
155.3
Naive CD8 T-cell nTPM: 152.7
Samples: 6
Max nTPM: 167.8
Min nTPM: 140.6
P10809_1016
140.6
P10809_1031
143.7
P10809_1050
144.1
P10809_1069
154.0
P10809_1087
166.1
P10809_1110
167.8
T-reg nTPM: 177.7
Samples: 6
Max nTPM: 202.7
Min nTPM: 138.5
P10809_1018
138.5
P10809_1037
182.1
P10809_1056
173.8
P10809_1075
176.2
P10809_1094
192.6
P10809_1106
202.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.9
Samples: 4
Max nTPM: 224.3
Min nTPM: 87.4
RHH5202_R3573
116.5
RHH5230_R3602
87.4
RHH5259_R3631
111.4
RHH5288_R3660
224.3
Effector memory CD8 T-cell nTPM: 86.0
Samples: 4
Max nTPM: 96.9
Min nTPM: 70.9
RHH5203_R3574
96.9
RHH5231_R3603
84.7
RHH5260_R3632
91.5
RHH5289_R3661
70.9
MAIT T-cell nTPM: 127.7
Samples: 4
Max nTPM: 170.3
Min nTPM: 107.3
RHH5233_R3605
107.3
RHH5205_R3576
113.0
RHH5262_R3634
120.1
RHH5297_R3663
170.3
Memory CD4 T-cell TFH nTPM: 134.0
Samples: 4
Max nTPM: 169.3
Min nTPM: 93.0
RHH5300_R3666
136.9
RHH5236_R3608
169.3
RHH5265_R3637
93.0
RHH5208_R3579
136.9
Memory CD4 T-cell Th1 nTPM: 130.1
Samples: 4
Max nTPM: 224.5
Min nTPM: 88.4
RHH5210_R3581
88.4
RHH5302_R3668
224.5
RHH5238_R3610
111.5
RHH5267_R3639
96.1
Memory CD4 T-cell Th1/Th17 nTPM: 132.8
Samples: 4
Max nTPM: 194.7
Min nTPM: 70.4
RHH5303_R3669
194.7
RHH5211_R3582
124.5
RHH5239_R3611
70.4
RHH5268_R3640
141.4
Memory CD4 T-cell Th17 nTPM: 103.6
Samples: 4
Max nTPM: 126.5
Min nTPM: 88.2
RHH5304_R3670
126.5
RHH5212_R3583
106.8
RHH5240_R3612
93.0
RHH5269_R3641
88.2
Memory CD4 T-cell Th2 nTPM: 124.0
Samples: 4
Max nTPM: 155.4
Min nTPM: 92.7
RHH5305_R3671
155.4
RHH5213_R3584
110.6
RHH5241_R3613
137.3
RHH5270_R3642
92.7
Naive CD4 T-cell nTPM: 117.7
Samples: 4
Max nTPM: 133.8
Min nTPM: 87.7
RHH5306_R3672
133.6
RHH5214_R3585
133.8
RHH5242_R3614
87.7
RHH5271_R3643
115.8
Naive CD8 T-cell nTPM: 107.5
Samples: 4
Max nTPM: 121.2
Min nTPM: 96.9
RHH5201_R3572
96.9
RHH5229_R3601
99.5
RHH5258_R3630
112.2
RHH5287_R3659
121.2
Non-Vd2 gdTCR nTPM: 117.0
Samples: 4
Max nTPM: 198.2
Min nTPM: 69.6
RHH5235_R3607
69.6
RHH5264_R3636
110.0
RHH5207_R3578
90.2
RHH5299_R3665
198.2
T-reg nTPM: 124.0
Samples: 4
Max nTPM: 184.8
Min nTPM: 83.6
RHH5301_R3667
184.8
RHH5237_R3609
114.2
RHH5266_R3638
83.6
RHH5209_R3580
113.5
Terminal effector memory CD4 T-cell nTPM: 97.0
Samples: 2
Max nTPM: 118.1
Min nTPM: 75.8
RHH5243_R3615
75.8
RHH5272_R3644
118.1
Terminal effector memory CD8 T-cell nTPM: 179.0
Samples: 4
Max nTPM: 300.8
Min nTPM: 112.5
RHH5232_R3604
112.5
RHH5204_R3575
300.8
RHH5261_R3633
124.8
RHH5296_R3662
178.0
Vd2 gdTCR nTPM: 193.9
Samples: 4
Max nTPM: 268.8
Min nTPM: 131.7
RHH5234_R3606
131.7
RHH5206_R3577
268.8
RHH5263_R3635
132.9
RHH5298_R3664
242.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
