HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:29.9 nTPM
HPA Brain:23.3 nTPM
GTEx:29.9 nTPM
FANTOM5:66.8 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:14.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034766Antibody HPA057246
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.3
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
1898 Male, age 80, left hemisphere 21.6
1855 Male, age 76, left hemisphere 18.1
2621 Female, age 67, right hemisphere 17.8
1911 Female, age 85, right hemisphere 16.8
2529 Female, age 94, left hemisphere 16.8
2148 Female, age 91, left hemisphere 16.3
Dentate gyrus
nTPM: 18.2
1927 Female, age 91, both hemispheres 21.0
2010 Male, age 76, both hemispheres 19.5
2530 Female, age 94, left hemisphere 19.1
2528 Male, age 74, both hemispheres 17.3
2246 Female, age 85, both hemispheres 16.6
2531 Female, age 67, both hemispheres 15.9
Entorhinal gyrus
nTPM: 19.0
2764 Male, age 80, right hemisphere 22.7
2613 Female, age 94, left hemisphere 21.2
1938 Female, age 85, left hemisphere 20.7
1787 Male, age 76, left hemisphere 19.5
2686 Male, age 75, right hemisphere 15.1
2117 Female, age 91, right hemisphere 15.0
Hippocampus, CA1
nTPM: 19.4
2749 Male, age 80, left hemisphere 28.2
2527 Male, age 74, both hemispheres 18.6
1873 Female, age 85, both hemispheres 17.9
2082 Female, age 91, right hemisphere 17.2
2045 Male, age 76, both hemispheres 14.9
Hippocampus, CA2
nTPM: 18.4
1892 Male, age 76, both hemispheres 22.4
1963 Male, age 80, left hemisphere 21.9
2249 Male, age 74, both hemispheres 17.7
1940 Female, age 85, left hemisphere 16.9
2113 Female, age 91, right hemisphere 16.5
2437 Female, age 94, left hemisphere 15.3
Hippocampus, CA3
nTPM: 20.4
2137 Male, age 80, left hemisphere 27.4
2436 Male, age 74, both hemispheres 23.0
1867 Male, age 76, both hemispheres 19.9
2620 Female, age 94, left hemisphere 19.6
1891 Female, age 85, both hemispheres 16.9
2861 Female, age 67, both hemispheres 15.7
Parahippocampal cortex
nTPM: 19.0
1850 Male, age 80, both hemispheres 24.7
2693 Female, age 94, both hemispheres 19.7
1990 Female, age 91, right hemisphere 19.6
1933 Female, age 85, both hemispheres 18.8
2250 Female, age 67, right hemisphere 18.8
2245 Female, age 91, both hemispheres 18.4
2692 Male, age 74, both hemispheres 18.4
2622 Female, age 67, right hemisphere 17.6
2532 Female, age 72, left hemisphere 17.2
2018 Male, age 76, both hemispheres 17.0
Perirhinal gyrus
nTPM: 23.3
1847 Female, age 91, left hemisphere 27.0
1794 Male, age 80, right hemisphere 26.4
1841 Female, age 85, right hemisphere 21.8
2521 Female, age 94, right hemisphere 21.2
2848 Male, age 76, right hemisphere 19.9
Subiculum
nTPM: 17.1
1901 Male, age 80, both hemispheres 19.4
1977 Female, age 85, both hemispheres 19.2
2042 Male, age 76, both hemispheres 18.5
2438 Female, age 94, left hemisphere 16.3
2729 Female, age 91, right hemisphere 15.4
2619 Male, age 74, both hemispheres 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.9
Samples: 197

Max nTPM: 65.7
Min nTPM: 12.8
Std nTPM: 8.4
Median nTPM: 28.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 51.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 51.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 50.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 48.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 45.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 45.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 44.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 43.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.8
FF:10169-103B7 60 years, female 89.3
FF:10153-102I9 76 years, female 44.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.1
Pig sample Sample description nTPM
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 33.7
Min nTPM: 25.1
Sample A Female 33.7
Sample B Female 28.3
Sample C Male 25.1
Sample D Male 26.2
Dorsal hippocampus
nTPM: 36.2
Samples: 4

Max nTPM: 45.8
Min nTPM: 29.4
Sample A Female 45.8
Sample B Female 32.7
Sample C Male 36.7
Sample D Male 29.4
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 26.7
Min nTPM: 22.0
Sample A Female 26.7
Sample B Female 25.1
Sample C Male 26.3
Sample D Male 22.0
Ventral hippocampus
nTPM: 33.3
Samples: 4

Max nTPM: 36.1
Min nTPM: 27.0
Sample A Female 34.3
Sample B Female 27.0
Sample C Male 36.1
Sample D Male 35.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 16.8
Min nTPM: 10.6
Sample A Male 14.9
Sample B Male 16.8
Sample C Female 14.7
Sample D Female 10.6
Hippocampal formation
nTPM: 14.7
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.6
Sample A Male 15.4
Sample B Male 16.4
Sample C Female 14.4
Sample D Female 12.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69626861 Antisense, RP_050428_01_D08, Mouse strain C57BL/6J (56 days, male) 0.9

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