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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.3
nTPM
Monaco:
258.1
nTPM
Schmiedel:
177.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.3
HPA sample
nTPM
gdT-cell nTPM: 37.3
Samples: 6
Max nTPM: 47.5
Min nTPM: 27.5
P10809_1007
32.6
P10809_1022
36.0
P10809_1041
27.5
P10809_1060
34.0
P10809_1077
46.4
P10809_1098
47.5
MAIT T-cell nTPM: 40.3
Samples: 6
Max nTPM: 47.2
Min nTPM: 28.2
P10809_1006
47.2
P10809_1024
45.2
P10809_1043
28.2
P10809_1062
41.7
P10809_1083
40.3
P10809_1097
39.1
Memory CD4 T-cell nTPM: 33.4
Samples: 6
Max nTPM: 45.1
Min nTPM: 25.2
P10809_1014
32.7
P10809_1026
25.2
P10809_1045
28.2
P10809_1064
34.8
P10809_1086
45.1
P10809_1113
34.1
Memory CD8 T-cell nTPM: 40.2
Samples: 5
Max nTPM: 49.3
Min nTPM: 27.0
P10809_1012
36.6
P10809_1027
39.9
P10809_1046
27.0
P10809_1065
48.2
P10809_1111
49.3
Naive CD4 T-cell nTPM: 30.3
Samples: 6
Max nTPM: 37.4
Min nTPM: 21.9
P10809_1015
34.4
P10809_1030
25.0
P10809_1049
21.9
P10809_1068
32.7
P10809_1085
37.4
P10809_1112
30.1
Naive CD8 T-cell nTPM: 36.5
Samples: 6
Max nTPM: 55.2
Min nTPM: 26.7
P10809_1016
31.7
P10809_1031
26.7
P10809_1050
29.4
P10809_1069
40.8
P10809_1087
55.2
P10809_1110
34.9
T-reg nTPM: 37.3
Samples: 6
Max nTPM: 49.5
Min nTPM: 30.5
P10809_1018
49.5
P10809_1037
37.6
P10809_1056
30.5
P10809_1075
34.0
P10809_1094
32.8
P10809_1106
39.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
258.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 198.4
Samples: 4
Max nTPM: 248.9
Min nTPM: 142.2
RHH5202_R3573
248.9
RHH5230_R3602
142.2
RHH5259_R3631
206.9
RHH5288_R3660
195.6
Effector memory CD8 T-cell nTPM: 258.1
Samples: 4
Max nTPM: 284.6
Min nTPM: 233.2
RHH5203_R3574
284.6
RHH5231_R3603
233.5
RHH5260_R3632
233.2
RHH5289_R3661
281.0
MAIT T-cell nTPM: 200.2
Samples: 4
Max nTPM: 235.3
Min nTPM: 156.2
RHH5233_R3605
231.5
RHH5205_R3576
235.3
RHH5262_R3634
177.7
RHH5297_R3663
156.2
Memory CD4 T-cell TFH nTPM: 181.8
Samples: 4
Max nTPM: 228.4
Min nTPM: 162.1
RHH5300_R3666
165.1
RHH5236_R3608
162.1
RHH5265_R3637
171.7
RHH5208_R3579
228.4
Memory CD4 T-cell Th1 nTPM: 171.1
Samples: 4
Max nTPM: 194.4
Min nTPM: 154.7
RHH5210_R3581
173.4
RHH5302_R3668
154.7
RHH5238_R3610
194.4
RHH5267_R3639
161.7
Memory CD4 T-cell Th1/Th17 nTPM: 181.6
Samples: 4
Max nTPM: 206.7
Min nTPM: 141.3
RHH5303_R3669
176.5
RHH5211_R3582
201.7
RHH5239_R3611
206.7
RHH5268_R3640
141.3
Memory CD4 T-cell Th17 nTPM: 200.5
Samples: 4
Max nTPM: 249.1
Min nTPM: 170.9
RHH5304_R3670
183.0
RHH5212_R3583
199.1
RHH5240_R3612
249.1
RHH5269_R3641
170.9
Memory CD4 T-cell Th2 nTPM: 188.0
Samples: 4
Max nTPM: 230.9
Min nTPM: 165.0
RHH5305_R3671
165.0
RHH5213_R3584
230.9
RHH5241_R3613
190.5
RHH5270_R3642
165.6
Naive CD4 T-cell nTPM: 162.4
Samples: 4
Max nTPM: 185.8
Min nTPM: 146.3
RHH5306_R3672
153.4
RHH5214_R3585
163.9
RHH5242_R3614
185.8
RHH5271_R3643
146.3
Naive CD8 T-cell nTPM: 170.5
Samples: 4
Max nTPM: 199.2
Min nTPM: 154.3
RHH5201_R3572
199.2
RHH5229_R3601
171.5
RHH5258_R3630
154.3
RHH5287_R3659
157.1
Non-Vd2 gdTCR nTPM: 242.0
Samples: 4
Max nTPM: 325.8
Min nTPM: 191.8
RHH5235_R3607
210.7
RHH5264_R3636
239.8
RHH5207_R3578
325.8
RHH5299_R3665
191.8
T-reg nTPM: 178.6
Samples: 4
Max nTPM: 209.8
Min nTPM: 144.6
RHH5301_R3667
152.5
RHH5237_R3609
209.8
RHH5266_R3638
144.6
RHH5209_R3580
207.3
Terminal effector memory CD4 T-cell nTPM: 200.5
Samples: 2
Max nTPM: 216.5
Min nTPM: 184.5
RHH5243_R3615
216.5
RHH5272_R3644
184.5
Terminal effector memory CD8 T-cell nTPM: 244.7
Samples: 4
Max nTPM: 266.8
Min nTPM: 224.9
RHH5232_R3604
266.8
RHH5204_R3575
224.9
RHH5261_R3633
251.4
RHH5296_R3662
235.8
Vd2 gdTCR nTPM: 197.7
Samples: 4
Max nTPM: 245.0
Min nTPM: 173.0
RHH5234_R3606
178.3
RHH5206_R3577
245.0
RHH5263_R3635
194.5
RHH5298_R3664
173.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
